Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ddx28Q9CWT6 Gm26384-201ENSMUST00000102183 110 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm12982-201ENSMUST00000117408 190 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm14887-201ENSMUST00000119522 663 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm12137-201ENSMUST00000119565 346 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm6584-201ENSMUST00000119671 447 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm11357-201ENSMUST00000119758 954 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm14815-201ENSMUST00000120060 488 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm15177-201ENSMUST00000120491 577 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm23212-201ENSMUST00000122718 60 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm4916-201ENSMUST00000126139 642 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm16274-201ENSMUST00000139251 592 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm26393-201ENSMUST00000157625 129 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm22889-201ENSMUST00000158639 58 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Mir5710-201ENSMUST00000176884 69 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm24897-201ENSMUST00000179033 107 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm8649-201ENSMUST00000181799 233 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm26988-201ENSMUST00000183296 945 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm28141-201ENSMUST00000186676 342 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm6680-201ENSMUST00000192789 950 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm38053-201ENSMUST00000193938 160 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm37431-201ENSMUST00000195102 111 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm45614-201ENSMUST00000209994 721 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm6842-201ENSMUST00000211361 390 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm8942-201ENSMUST00000217892 400 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm25792-201ENSMUST00000083289 100 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Mir132-201ENSMUST00000083603 66 ntBASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ddx28Q9CWT6 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm14687-201ENSMUST00000120206 363 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm15037-201ENSMUST00000120358 259 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm23118-201ENSMUST00000122657 187 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm22236-201ENSMUST00000157093 106 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm26348-201ENSMUST00000157528 240 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm25436-201ENSMUST00000158275 145 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm24551-201ENSMUST00000158645 92 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm10357-201ENSMUST00000159886 264 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm23365-201ENSMUST00000175019 125 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm25960-201ENSMUST00000175110 125 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm44453-201ENSMUST00000175161 126 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm20693-201ENSMUST00000177431 211 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm25195-201ENSMUST00000177656 126 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm26960-201ENSMUST00000182263 412 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm38329-201ENSMUST00000193473 427 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm43556-201ENSMUST00000196186 681 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm43814-201ENSMUST00000197851 413 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm42453-201ENSMUST00000200477 409 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm45312-201ENSMUST00000210566 311 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 Gm8785-201ENSMUST00000220259 487 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.39□□□□□ -1.87
Ddx28Q9CWT6 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms