Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm14731-201ENSMUST00000119216 376 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm15103-201ENSMUST00000119893 871 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm26027-201ENSMUST00000122725 268 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Nron-204ENSMUST00000158971 370 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Mir5136-201ENSMUST00000175573 76 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm26991-201ENSMUST00000180950 620 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm43659-201ENSMUST00000200894 628 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm44030-201ENSMUST00000204865 432 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm45742-201ENSMUST00000212400 433 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm19563-201ENSMUST00000222031 270 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm22970-201ENSMUST00000083304 186 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm23452-201ENSMUST00000083327 107 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.6□□□□□ -1.83
Smc1aQ9CU62 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm25407-201ENSMUST00000104102 134 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm14981-201ENSMUST00000117325 943 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm23415-201ENSMUST00000175519 83 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm32340-201ENSMUST00000192883 259 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm37576-201ENSMUST00000194228 372 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.59□□□□□ -1.83
Smc1aQ9CU62 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.59□□□□□ -1.84
Smc1aQ9CU62 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Smc1aQ9CU62 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.59□□□□□ -1.84
Smc1aQ9CU62 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm16431-201ENSMUST00000117454 431 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm13443-201ENSMUST00000120770 555 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm14600-201ENSMUST00000121032 630 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm23671-201ENSMUST00000157472 103 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm26088-201ENSMUST00000157896 131 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm20612-201ENSMUST00000176318 236 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm44594-201ENSMUST00000208982 407 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm39147-201ENSMUST00000211376 465 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Gm23939-201ENSMUST00000082880 133 ntBASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Smc1aQ9CU62 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Gm13692-201ENSMUST00000120774 371 ntBASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Gm14463-201ENSMUST00000121117 498 ntBASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Gm24914-201ENSMUST00000157285 313 ntBASIC3.57□□□□□ -1.84
Smc1aQ9CU62 Gm22769-201ENSMUST00000158367 98 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms