Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc43Q9CR29 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm15142-201ENSMUST00000121013 856 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm24936-201ENSMUST00000122598 247 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm23716-201ENSMUST00000157348 144 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm23326-201ENSMUST00000157419 105 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm22380-201ENSMUST00000157479 95 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm4479-201ENSMUST00000178807 171 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm28438-201ENSMUST00000188299 345 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm36943-201ENSMUST00000194422 282 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm7675-201ENSMUST00000208828 686 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm17911-201ENSMUST00000210806 877 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm6842-201ENSMUST00000211361 390 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm26128-201ENSMUST00000083170 110 ntBASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc43Q9CR29 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm12640-201ENSMUST00000120097 310 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm22225-201ENSMUST00000157358 278 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm25667-201ENSMUST00000157701 275 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm6651-201ENSMUST00000189471 271 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm38075-201ENSMUST00000191979 920 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Mir703-201ENSMUST00000197105 109 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm9712-201ENSMUST00000210842 311 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 LOC667541-201ENSMUST00000223408 278 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm23932-201ENSMUST00000082914 107 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm23136-201ENSMUST00000083425 99 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm10161-201ENSMUST00000091506 204 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.59□□□□□ -1.83
Ccdc43Q9CR29 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ccdc43Q9CR29 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc43Q9CR29 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm13239-201ENSMUST00000119920 637 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm13901-201ENSMUST00000137252 468 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm25572-201ENSMUST00000157527 172 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm17117-201ENSMUST00000163665 299 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm17183-201ENSMUST00000171170 493 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm17186-201ENSMUST00000171742 456 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Mir8118-201ENSMUST00000183962 129 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm38213-201ENSMUST00000193203 173 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Olfr936-202ENSMUST00000216912 937 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm24533-201ENSMUST00000083138 196 ntBASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc43Q9CR29 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms