Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm35931-201ENSMUST00000203931 448 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm45367-201ENSMUST00000210171 347 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.36□□□□□ -1.55
Trim11Q99PQ2 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm13932-201ENSMUST00000120873 610 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm25103-201ENSMUST00000122671 318 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm26347-201ENSMUST00000157526 131 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm31931-201ENSMUST00000219666 222 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm23460-201ENSMUST00000083258 109 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm22293-201ENSMUST00000083314 109 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm22155-201ENSMUST00000083836 162 ntBASIC5.35□□□□□ -1.55
Trim11Q99PQ2 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim11Q99PQ2 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm15844-201ENSMUST00000118016 576 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm11923-201ENSMUST00000118135 508 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm15377-201ENSMUST00000119594 246 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Trav20-201ENSMUST00000142754 347 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm26098-201ENSMUST00000157247 288 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm26320-201ENSMUST00000157742 306 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm17153-201ENSMUST00000171314 490 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm26828-201ENSMUST00000180640 172 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm27849-201ENSMUST00000183673 125 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm3145-201ENSMUST00000188584 220 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm19418-201ENSMUST00000197436 580 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm45200-201ENSMUST00000207434 919 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm17766-201ENSMUST00000209223 442 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm22358-201ENSMUST00000082877 122 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm25188-201ENSMUST00000083913 122 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm25821-201ENSMUST00000093657 133 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim11Q99PQ2 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.34□□□□□ -1.56
Trim11Q99PQ2 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Trim11Q99PQ2 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gm15223-201ENSMUST00000120989 826 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gm15213-201ENSMUST00000122098 216 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gm23327-201ENSMUST00000157420 78 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gm25920-201ENSMUST00000158307 99 ntBASIC5.33□□□□□ -1.56
Trim11Q99PQ2 Gm25520-201ENSMUST00000158389 118 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms