Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm27940-201ENSMUST00000184449 98 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm5368-201ENSMUST00000189012 589 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm37050-201ENSMUST00000193464 466 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm37743-201ENSMUST00000194645 376 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm18971-201ENSMUST00000197240 374 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm44353-201ENSMUST00000200618 138 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm44726-201ENSMUST00000203427 217 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm45772-201ENSMUST00000212961 240 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm22061-201ENSMUST00000082557 107 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm23510-201ENSMUST00000083083 163 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Mir452-201ENSMUST00000093629 85 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
H1fooQ8VIK3 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm23608-201ENSMUST00000104545 128 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm14107-201ENSMUST00000117774 330 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm15399-201ENSMUST00000118055 724 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm14574-201ENSMUST00000120644 279 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm25341-201ENSMUST00000157461 268 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm25335-201ENSMUST00000158043 103 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm23513-201ENSMUST00000158181 133 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm20794-201ENSMUST00000177626 628 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm28090-201ENSMUST00000189458 664 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm17781-201ENSMUST00000195232 649 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm44324-201ENSMUST00000198517 135 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm7751-201ENSMUST00000212868 709 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm46138-201ENSMUST00000215294 426 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm6988-201ENSMUST00000222676 375 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm26446-201ENSMUST00000082455 103 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Snord21-201ENSMUST00000082519 94 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm26263-201ENSMUST00000083281 164 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm23875-201ENSMUST00000083711 318 ntBASIC3.64□□□□□ -1.83
H1fooQ8VIK3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
H1fooQ8VIK3 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm10552-201ENSMUST00000113396 372 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm42606-201ENSMUST00000114209 239 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm15175-201ENSMUST00000117629 132 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm11384-201ENSMUST00000121376 303 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm15167-201ENSMUST00000121997 187 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm20674-201ENSMUST00000177452 369 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm8532-201ENSMUST00000179174 461 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm27254-201ENSMUST00000183926 517 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm33354-201ENSMUST00000195448 906 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 Gm45651-201ENSMUST00000210857 335 ntBASIC3.63□□□□□ -1.83
H1fooQ8VIK3 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms