Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm3681-201ENSMUST00000179940 639 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm7870-201ENSMUST00000184467 616 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm29062-201ENSMUST00000186032 694 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm28255-201ENSMUST00000187101 694 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm29545-201ENSMUST00000188878 694 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm18775-201ENSMUST00000190763 586 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm37641-201ENSMUST00000193837 239 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm19126-201ENSMUST00000207896 509 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Gm8423-201ENSMUST00000211387 607 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Atg4aQ8C9S8 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm7853-201ENSMUST00000100708 478 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm25213-201ENSMUST00000102388 113 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm22793-201ENSMUST00000157227 330 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm24532-201ENSMUST00000157951 286 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm25874-201ENSMUST00000178030 79 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Mir8096-201ENSMUST00000184526 127 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm32340-201ENSMUST00000192883 259 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Atg4aQ8C9S8 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm22208-201ENSMUST00000122658 110 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm25553-201ENSMUST00000158076 79 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm16490-201ENSMUST00000165299 351 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm42805-201ENSMUST00000196158 276 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm44348-201ENSMUST00000200165 122 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm9845-201ENSMUST00000056409 598 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm26129-201ENSMUST00000082719 107 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm22739-201ENSMUST00000083437 160 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm23516-201ENSMUST00000093728 107 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.79□□□□□ -1.8
Atg4aQ8C9S8 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm14987-201ENSMUST00000117820 676 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm14358-201ENSMUST00000118458 403 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm14926-201ENSMUST00000120650 508 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm23865-201ENSMUST00000157723 97 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm2389-201ENSMUST00000160487 189 ntBASIC3.78□□□□□ -1.8
Atg4aQ8C9S8 Gm6486-201ENSMUST00000166202 434 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms