Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25647-201ENSMUST00000101832 78 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm25823-201ENSMUST00000101995 78 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm15074-201ENSMUST00000117603 936 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm5754-201ENSMUST00000118774 892 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm12803-201ENSMUST00000118907 821 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm15103-201ENSMUST00000119893 871 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm15147-201ENSMUST00000122263 483 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm24220-201ENSMUST00000177753 79 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm25988-201ENSMUST00000177759 79 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm23471-201ENSMUST00000177886 79 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm26488-201ENSMUST00000178225 79 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm23449-201ENSMUST00000179208 79 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm25221-201ENSMUST00000180051 79 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm37866-201ENSMUST00000191950 696 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm29747-201ENSMUST00000194764 585 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm18327-201ENSMUST00000202426 830 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm43967-201ENSMUST00000203787 301 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm44399-201ENSMUST00000205043 226 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.6□□□□□ -1.99
Trub1Q8C0D0 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm12213-201ENSMUST00000119924 353 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm22521-201ENSMUST00000158272 134 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm29523-201ENSMUST00000191415 699 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Gm23850-201ENSMUST00000083830 169 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.59□□□□□ -1.99
Trub1Q8C0D0 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trub1Q8C0D0 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.59□□□□□ -2
Trub1Q8C0D0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Trub1Q8C0D0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.59□□□□□ -2
Trub1Q8C0D0 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Trub1Q8C0D0 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trub1Q8C0D0 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Snora36b-201ENSMUST00000104383 132 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm26247-201ENSMUST00000116702 91 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm15382-201ENSMUST00000118011 537 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm16383-201ENSMUST00000118122 232 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm11943-201ENSMUST00000119473 327 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm12495-201ENSMUST00000119750 447 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm15116-201ENSMUST00000122248 663 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm25185-201ENSMUST00000157754 96 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm27477-201ENSMUST00000184649 143 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm37817-201ENSMUST00000195276 434 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm45273-201ENSMUST00000211559 281 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.58□□□□□ -2
Trub1Q8C0D0 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm23447-201ENSMUST00000082798 163 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Trub1Q8C0D0 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.58□□□□□ -2
Trub1Q8C0D0 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trub1Q8C0D0 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trub1Q8C0D0 Mir592-201ENSMUST00000102113 96 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms