Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm7380-201ENSMUST00000211599 466 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm46234-201ENSMUST00000218702 259 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm22868-201ENSMUST00000083955 164 ntBASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Usp40Q8BWR4 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm3470-201ENSMUST00000160819 420 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm6625-201ENSMUST00000177870 272 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm43723-201ENSMUST00000196886 189 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm43814-201ENSMUST00000197851 413 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm19243-201ENSMUST00000198592 269 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm45402-201ENSMUST00000211796 223 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Mir30e-201ENSMUST00000083475 92 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Gm45884-201ENSMUST00000209540 3416 ntBASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Usp40Q8BWR4 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm26273-201ENSMUST00000104180 131 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm13082-201ENSMUST00000118877 561 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm15799-201ENSMUST00000120899 289 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm14736-201ENSMUST00000121470 336 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm14364-201ENSMUST00000129209 267 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm22519-201ENSMUST00000158270 178 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm22136-201ENSMUST00000158751 268 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm15900-201ENSMUST00000161584 342 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm8207-201ENSMUST00000171204 502 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm29334-201ENSMUST00000190334 357 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm33973-201ENSMUST00000195148 534 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Igkv11-114-201ENSMUST00000200013 346 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm44634-201ENSMUST00000206119 152 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm2676-201ENSMUST00000207279 606 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm44858-201ENSMUST00000207360 154 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm45614-201ENSMUST00000209994 721 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Gm45176-201ENSMUST00000207696 4096 ntBASIC5.41□□□□□ -1.54
Usp40Q8BWR4 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm14050-201ENSMUST00000117052 346 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Defa-ps9-201ENSMUST00000118264 276 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm14714-201ENSMUST00000119743 439 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm13356-201ENSMUST00000121678 335 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm24857-201ENSMUST00000158061 310 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Spin2g-201ENSMUST00000178425 687 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm25939-201ENSMUST00000179876 191 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm6075-201ENSMUST00000186816 486 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm38098-201ENSMUST00000194115 241 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm6012-201ENSMUST00000210821 730 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm21112-201ENSMUST00000212224 578 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm18703-201ENSMUST00000215318 333 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm9309-201ENSMUST00000223537 546 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Gm22572-201ENSMUST00000082985 105 ntBASIC5.4□□□□□ -1.54
Usp40Q8BWR4 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
Usp40Q8BWR4 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Usp40Q8BWR4 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.4□□□□□ -1.55
Usp40Q8BWR4 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Usp40Q8BWR4 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Usp40Q8BWR4 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms