Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm6361-201ENSMUST00000091031 435 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm4736-201ENSMUST00000100870 380 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm24318-201ENSMUST00000104490 131 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm14594-201ENSMUST00000118052 537 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm14590-201ENSMUST00000118934 537 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm15926-201ENSMUST00000120492 550 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm23124-201ENSMUST00000157650 107 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm23583-201ENSMUST00000158533 289 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm20612-201ENSMUST00000176318 236 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm26189-201ENSMUST00000179879 107 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm14596-201ENSMUST00000180268 537 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm14595-201ENSMUST00000180335 537 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm26914-201ENSMUST00000182262 223 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm28163-201ENSMUST00000187099 325 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm37658-201ENSMUST00000192672 315 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm28724-202ENSMUST00000194218 295 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm43227-201ENSMUST00000202239 677 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm44871-201ENSMUST00000207821 497 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm45588-201ENSMUST00000211213 630 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm30155-201ENSMUST00000223458 339 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Mir370-201ENSMUST00000083499 79 ntBASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Ubfd1Q78JW9 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm13268-201ENSMUST00000117485 433 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm12053-201ENSMUST00000119022 252 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm14392-201ENSMUST00000120332 401 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm14413-201ENSMUST00000122158 408 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm10357-201ENSMUST00000159886 264 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm9227-201ENSMUST00000194733 566 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm44465-201ENSMUST00000199536 114 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm23614-201ENSMUST00000082598 107 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm23848-201ENSMUST00000083826 106 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.92□□□□□ -1.78
Ubfd1Q78JW9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ubfd1Q78JW9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms