Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Topbp1Q6ZQF0 Gm19761-201ENSMUST00000205372 391 ntBASIC3.17□□□□□ -1.9
Topbp1Q6ZQF0 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Topbp1Q6ZQF0 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Topbp1Q6ZQF0 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm23223-201ENSMUST00000158119 127 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm22093-201ENSMUST00000158980 111 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm45654-201ENSMUST00000210980 123 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 AC137950.3-201ENSMUST00000228250 246 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Gm19194-201ENSMUST00000192015 3774 ntBASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.16□□□□□ -1.9
Topbp1Q6ZQF0 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm12515-201ENSMUST00000120116 361 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm13419-201ENSMUST00000121711 271 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm25910-201ENSMUST00000157620 140 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm24237-201ENSMUST00000157790 132 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm26001-201ENSMUST00000157989 103 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm17177-201ENSMUST00000169144 483 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm24317-201ENSMUST00000178536 107 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm37732-201ENSMUST00000194377 316 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm18557-201ENSMUST00000218710 433 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Mir222-201ENSMUST00000083537 79 ntBASIC3.15□□□□□ -1.9
Topbp1Q6ZQF0 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm24098-201ENSMUST00000102075 109 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm25381-201ENSMUST00000102078 109 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm6501-201ENSMUST00000187178 916 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm13471-201ENSMUST00000122057 433 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Mir3087-201ENSMUST00000199405 56 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 CT009754.4-201ENSMUST00000221430 565 ntBASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Topbp1Q6ZQF0 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Gm23980-201ENSMUST00000157135 158 ntBASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Gm22891-201ENSMUST00000158641 164 ntBASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Gm42818-201ENSMUST00000198869 987 ntBASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Topbp1Q6ZQF0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm15854-201ENSMUST00000118879 808 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm26024-201ENSMUST00000158657 322 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Mir1892-201ENSMUST00000197752 80 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Gm45772-201ENSMUST00000212961 240 ntBASIC3.12□□□□□ -1.91
Topbp1Q6ZQF0 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms