Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm11566-201ENSMUST00000118550 203 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm6797-201ENSMUST00000119440 512 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm5287-201ENSMUST00000120666 598 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm22514-201ENSMUST00000122547 308 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm25106-201ENSMUST00000122672 134 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm11281-201ENSMUST00000141391 576 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm22597-201ENSMUST00000157602 80 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm29335-201ENSMUST00000188361 459 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm9722-201ENSMUST00000194568 802 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm43954-201ENSMUST00000204634 544 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm44879-201ENSMUST00000207007 503 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm22508-201ENSMUST00000082772 110 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm23518-201ENSMUST00000082835 153 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm24043-201ENSMUST00000083108 116 ntBASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx55Q6ZPL9 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Mir667-201ENSMUST00000102441 92 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm15613-201ENSMUST00000118396 326 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm13406-201ENSMUST00000121991 256 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm24008-201ENSMUST00000157733 138 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm24537-201ENSMUST00000157950 102 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm23028-201ENSMUST00000158773 265 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm5263-201ENSMUST00000163646 601 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm21737-201ENSMUST00000178112 664 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm21815-201ENSMUST00000178213 664 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm20874-201ENSMUST00000178356 663 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm21744-201ENSMUST00000178403 662 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm26335-201ENSMUST00000178449 107 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm20901-201ENSMUST00000180177 664 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm27828-201ENSMUST00000184108 119 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm21647-201ENSMUST00000189755 664 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm38044-201ENSMUST00000192964 487 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm38080-201ENSMUST00000194035 268 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm43505-201ENSMUST00000200579 139 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm45588-201ENSMUST00000211213 630 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ddx55Q6ZPL9 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm23175-201ENSMUST00000104371 132 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm15899-201ENSMUST00000128586 238 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm23167-201ENSMUST00000157155 103 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm23667-201ENSMUST00000157466 120 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm21638-201ENSMUST00000179473 836 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm38076-201ENSMUST00000193889 450 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddx55Q6ZPL9 Gm44295-201ENSMUST00000203805 437 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms