Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Mir758-201ENSMUST00000103260 81 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm45395-201ENSMUST00000209891 559 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm30674-201ENSMUST00000214523 392 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm23407-201ENSMUST00000082538 91 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm14119-201ENSMUST00000119511 235 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm11483-201ENSMUST00000119839 247 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm11404-201ENSMUST00000120872 494 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm25902-201ENSMUST00000158493 318 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm3851-201ENSMUST00000168653 318 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm6501-201ENSMUST00000187178 916 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Scn10aQ6QIY3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Scn10aQ6QIY3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm23256-201ENSMUST00000102235 110 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm24601-201ENSMUST00000157970 143 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm20039-201ENSMUST00000210329 394 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm22304-201ENSMUST00000082688 129 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Scn10aQ6QIY3 Gm15019-201ENSMUST00000120148 434 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm16533-201ENSMUST00000140035 228 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm8502-201ENSMUST00000185708 901 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm21147-201ENSMUST00000186046 913 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm18193-201ENSMUST00000210017 772 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm45689-201ENSMUST00000210522 133 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm45382-201ENSMUST00000210607 151 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm8031-201ENSMUST00000213430 626 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm18899-201ENSMUST00000217663 546 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm24890-201ENSMUST00000104389 102 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm11414-201ENSMUST00000121795 263 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm43295-201ENSMUST00000201439 412 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
Scn10aQ6QIY3 Gm13406-201ENSMUST00000121991 256 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm14402-201ENSMUST00000122217 508 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm23867-201ENSMUST00000122649 274 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm23670-201ENSMUST00000157469 119 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm24061-201ENSMUST00000157489 120 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Mir3106-201ENSMUST00000175401 82 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm37290-201ENSMUST00000195775 339 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm19599-201ENSMUST00000218898 358 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm22245-201ENSMUST00000082479 103 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms