Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm6797-201ENSMUST00000119440 512 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm8757-201ENSMUST00000119660 372 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm11357-201ENSMUST00000119758 954 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm11704-201ENSMUST00000120031 214 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm14687-201ENSMUST00000120206 363 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm12897-201ENSMUST00000120341 250 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm24059-201ENSMUST00000157493 312 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm9593-201ENSMUST00000166034 469 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm27392-201ENSMUST00000185041 101 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm29740-201ENSMUST00000193182 655 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Trbv8-201ENSMUST00000194020 285 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Smarca1Q6PGB8 Gm14445-201ENSMUST00000117051 1484 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm11490-201ENSMUST00000118128 272 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm13349-201ENSMUST00000118436 411 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm11869-201ENSMUST00000118701 329 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm15147-201ENSMUST00000122263 483 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm22390-201ENSMUST00000157588 325 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm22733-201ENSMUST00000158094 91 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm24930-201ENSMUST00000158315 83 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm24739-201ENSMUST00000158855 292 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm27445-201ENSMUST00000184484 72 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm37104-201ENSMUST00000193278 196 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm43245-201ENSMUST00000197603 468 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm19649-201ENSMUST00000201126 822 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm19726-201ENSMUST00000205008 240 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm8423-201ENSMUST00000211387 607 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm35857-201ENSMUST00000212739 178 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm24147-201ENSMUST00000082763 144 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm25581-201ENSMUST00000083410 164 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm22740-201ENSMUST00000083439 109 ntBASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Smarca1Q6PGB8 Gm25876-201ENSMUST00000104329 119 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm14537-201ENSMUST00000117464 599 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm11352-201ENSMUST00000119264 517 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm23887-201ENSMUST00000122683 172 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm22236-201ENSMUST00000157093 106 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm23168-201ENSMUST00000157156 143 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm23352-201ENSMUST00000158428 64 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm29641-201ENSMUST00000188955 259 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm43652-201ENSMUST00000196219 675 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm19457-201ENSMUST00000200995 448 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm43224-201ENSMUST00000201567 898 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Gm26206-201ENSMUST00000082908 110 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Snord15a-201ENSMUST00000083888 148 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.06□□□□□ -1.76
Smarca1Q6PGB8 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms