Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Gm26446-201ENSMUST00000082455 103 ntBASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Gm23300-201ENSMUST00000082712 125 ntBASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Gm23970-201ENSMUST00000083319 107 ntBASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Rnf220Q6PDX6 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm14681-201ENSMUST00000118047 411 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm13537-201ENSMUST00000120467 267 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm23534-201ENSMUST00000157539 97 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm26041-201ENSMUST00000158148 108 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Mir6343-201ENSMUST00000183584 84 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm29192-201ENSMUST00000190942 377 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm44060-201ENSMUST00000204440 410 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm17766-201ENSMUST00000209223 442 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm33601-201ENSMUST00000210001 961 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm19256-201ENSMUST00000218550 231 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm23404-201ENSMUST00000082543 97 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Gm23514-201ENSMUST00000082827 130 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Mir452-201ENSMUST00000093629 85 ntBASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Rnf220Q6PDX6 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm12871-201ENSMUST00000118758 438 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm15206-201ENSMUST00000119143 454 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm15231-201ENSMUST00000119174 447 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm14175-201ENSMUST00000119835 241 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm25341-201ENSMUST00000157461 268 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm23411-201ENSMUST00000157988 62 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm3470-201ENSMUST00000160819 420 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm17148-201ENSMUST00000164702 249 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm3370-201ENSMUST00000171785 500 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm28920-201ENSMUST00000189957 699 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm37636-201ENSMUST00000193583 359 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Mir7682-201ENSMUST00000198467 58 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm18540-201ENSMUST00000204025 526 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm44513-201ENSMUST00000206811 439 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm25579-201ENSMUST00000083407 106 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Mir21a-201ENSMUST00000083521 92 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.16□□□□□ -1.74
Rnf220Q6PDX6 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Rnf220Q6PDX6 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Rnf220Q6PDX6 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm22370-201ENSMUST00000102422 83 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Mir466j-201ENSMUST00000116876 122 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Mir669i-201ENSMUST00000117007 127 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm14823-201ENSMUST00000117698 238 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm11785-201ENSMUST00000120165 601 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm15379-201ENSMUST00000121224 648 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm25967-201ENSMUST00000157168 147 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm24192-201ENSMUST00000157978 145 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm22434-201ENSMUST00000158549 122 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm23700-201ENSMUST00000158842 102 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm26430-201ENSMUST00000178054 107 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm21171-201ENSMUST00000180048 673 ntBASIC4.15□□□□□ -1.75
Rnf220Q6PDX6 Gm27999-201ENSMUST00000183539 193 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms