Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm31849-201ENSMUST00000220306 375 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm7753-201ENSMUST00000221007 867 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm19441-201ENSMUST00000221545 330 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 AC147628.1-201ENSMUST00000228193 688 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm9762-201ENSMUST00000036976 444 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp49Q6P9L4 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm25088-201ENSMUST00000101803 79 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm25764-201ENSMUST00000104092 134 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm15148-201ENSMUST00000117602 156 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm15613-201ENSMUST00000118396 326 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm8757-201ENSMUST00000119660 372 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm11512-201ENSMUST00000119669 663 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm14362-201ENSMUST00000121679 273 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm25784-201ENSMUST00000122524 81 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm15254-201ENSMUST00000149567 273 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm5263-201ENSMUST00000163646 601 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Mir5101-201ENSMUST00000175181 83 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm25670-201ENSMUST00000178423 107 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Spin2g-201ENSMUST00000178425 687 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm26239-201ENSMUST00000178842 107 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm24267-201ENSMUST00000179841 107 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm24306-201ENSMUST00000180229 79 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm17946-201ENSMUST00000186856 538 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm28785-201ENSMUST00000187478 379 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm28404-201ENSMUST00000190242 453 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm36984-201ENSMUST00000192770 235 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm43407-201ENSMUST00000199816 317 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm45590-201ENSMUST00000209715 262 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm35857-201ENSMUST00000212739 178 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm29809-201ENSMUST00000218423 493 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm5265-201ENSMUST00000076828 342 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm24292-201ENSMUST00000082888 107 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gm22868-201ENSMUST00000083955 164 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp49Q6P9L4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm25560-201ENSMUST00000104606 176 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm25848-201ENSMUST00000116790 144 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm24534-201ENSMUST00000157949 291 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm20773-201ENSMUST00000178940 681 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm43652-201ENSMUST00000196219 675 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm3010-201ENSMUST00000198805 448 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm43367-201ENSMUST00000199986 625 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm44353-201ENSMUST00000200618 138 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm18120-201ENSMUST00000220079 511 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm10038-201ENSMUST00000077233 441 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Snord14e-201ENSMUST00000082857 90 ntBASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Usp49Q6P9L4 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Usp49Q6P9L4 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms