Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ift88Q61371 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ift88Q61371 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ift88Q61371 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ift88Q61371 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ift88Q61371 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.16□□□□□ -1.74
Ift88Q61371 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ift88Q61371 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.15□□□□□ -1.74
Ift88Q61371 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ift88Q61371 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.15□□□□□ -1.74
Ift88Q61371 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ift88Q61371 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.15□□□□□ -1.74
Ift88Q61371 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm23987-201ENSMUST00000117039 129 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm9003-201ENSMUST00000121810 482 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm14530-201ENSMUST00000122391 333 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm22637-201ENSMUST00000158144 283 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm23583-201ENSMUST00000158533 289 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.15□□□□□ -1.75
Ift88Q61371 Mir3062-201ENSMUST00000174986 105 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm4076-201ENSMUST00000179230 965 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm22631-201ENSMUST00000179656 94 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm27028-201ENSMUST00000182303 399 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm28623-201ENSMUST00000187219 192 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm37416-201ENSMUST00000193596 318 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm43804-201ENSMUST00000198280 456 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm44871-201ENSMUST00000207821 497 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.15□□□□□ -1.75
Ift88Q61371 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.15□□□□□ -1.75
Ift88Q61371 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ift88Q61371 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ift88Q61371 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm22572-201ENSMUST00000082985 105 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Snord38a-201ENSMUST00000083746 71 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Ift88Q61371 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.15□□□□□ -1.75
Ift88Q61371 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ift88Q61371 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ift88Q61371 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ift88Q61371 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ift88Q61371 Gm6797-201ENSMUST00000119440 512 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm15112-201ENSMUST00000120152 860 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm11430-201ENSMUST00000121317 217 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm24739-201ENSMUST00000158855 292 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.14□□□□□ -1.75
Ift88Q61371 Gm8224-201ENSMUST00000166178 497 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Mir3964-201ENSMUST00000174898 74 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm24100-201ENSMUST00000178592 79 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm24137-201ENSMUST00000180055 79 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm22391-201ENSMUST00000180356 79 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Npn2-202ENSMUST00000189275 235 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ift88Q61371 Gm18403-201ENSMUST00000192907 529 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm9227-201ENSMUST00000194733 566 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm36953-201ENSMUST00000195295 268 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.14□□□□□ -1.75
Ift88Q61371 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm18100-201ENSMUST00000200897 452 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm43578-201ENSMUST00000201250 459 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm6240-201ENSMUST00000208014 473 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm34783-201ENSMUST00000209159 303 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm17829-201ENSMUST00000219782 344 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.14□□□□□ -1.75
Ift88Q61371 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ift88Q61371 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ift88Q61371 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ift88Q61371 Gm24268-201ENSMUST00000082990 110 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm24611-201ENSMUST00000083272 107 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ift88Q61371 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ift88Q61371 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ift88Q61371 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.14□□□□□ -1.75
Ift88Q61371 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms