Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21914-201ENSMUST00000178452 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21723-201ENSMUST00000178692 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21916-201ENSMUST00000178771 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21801-201ENSMUST00000178865 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21633-201ENSMUST00000178941 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21821-201ENSMUST00000179646 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21588-201ENSMUST00000180074 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21780-201ENSMUST00000180128 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21572-201ENSMUST00000180134 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm21529-201ENSMUST00000180175 498 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm29370-202ENSMUST00000187476 499 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm38281-201ENSMUST00000192301 315 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.94□□□□□ -1.94
Usf1Q61069 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm44256-201ENSMUST00000203304 335 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm44274-201ENSMUST00000203417 256 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm43899-201ENSMUST00000203675 246 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm45696-201ENSMUST00000212088 985 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm18921-201ENSMUST00000221798 366 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 AC167669.1-201ENSMUST00000224932 384 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usf1Q61069 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.94□□□□□ -1.94
Usf1Q61069 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usf1Q61069 Mir350-201ENSMUST00000083639 99 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Usf1Q61069 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.94□□□□□ -1.94
Usf1Q61069 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Usf1Q61069 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Usf1Q61069 Mir599-201ENSMUST00000102378 88 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm14518-201ENSMUST00000117351 542 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm11429-201ENSMUST00000119089 144 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm14731-201ENSMUST00000119216 376 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm11693-201ENSMUST00000119625 565 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm12118-201ENSMUST00000119766 532 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm11876-201ENSMUST00000120002 269 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm23234-201ENSMUST00000157304 134 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm22187-201ENSMUST00000157819 129 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm17061-201ENSMUST00000163167 499 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm20656-201ENSMUST00000176925 518 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm21827-201ENSMUST00000178247 423 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm29389-201ENSMUST00000191562 352 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm38149-201ENSMUST00000191943 339 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Usf1Q61069 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC2.93□□□□□ -1.94
Usf1Q61069 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm5322-201ENSMUST00000206142 699 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm22245-201ENSMUST00000082479 103 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Gm24254-201ENSMUST00000083702 104 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.93□□□□□ -1.94
Usf1Q61069 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usf1Q61069 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms