Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm42548-201ENSMUST00000202669 3933 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13550-201ENSMUST00000118185 525 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm15106-201ENSMUST00000119691 821 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13867-201ENSMUST00000120844 395 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm25360-201ENSMUST00000178786 191 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm7837-201ENSMUST00000190873 412 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm37670-201ENSMUST00000193622 229 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm45651-201ENSMUST00000210857 335 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm7948-201ENSMUST00000212607 844 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Gm37115-201ENSMUST00000193750 2849 ntBASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf1Q5U4C3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Mir466b-8-201ENSMUST00000103883 86 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm24469-201ENSMUST00000104487 131 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm11432-201ENSMUST00000117334 231 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm12466-201ENSMUST00000121199 620 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm24477-201ENSMUST00000157438 103 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm4761-201ENSMUST00000178086 582 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm9022-202ENSMUST00000183285 483 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm27875-201ENSMUST00000184425 123 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm27286-201ENSMUST00000184934 179 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm19637-201ENSMUST00000185933 579 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Mir466e-201ENSMUST00000198862 84 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Mir466c-1-201ENSMUST00000200654 84 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm19096-201ENSMUST00000209705 766 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 AC166902.1-201ENSMUST00000216653 517 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 AC124772.1-201ENSMUST00000221325 151 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Scaf1Q5U4C3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm3623-201ENSMUST00000173643 2747 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm15206-201ENSMUST00000119143 454 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm11718-201ENSMUST00000119942 537 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm12924-201ENSMUST00000121747 318 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm11403-201ENSMUST00000122195 369 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm23318-201ENSMUST00000158000 108 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm22726-201ENSMUST00000158089 179 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm24931-201ENSMUST00000158324 107 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm23115-201ENSMUST00000158480 108 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm22448-201ENSMUST00000179254 107 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm9696-202ENSMUST00000191541 830 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm45236-201ENSMUST00000208632 229 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Gm45498-201ENSMUST00000210346 283 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 AC130821.1-201ENSMUST00000221997 293 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 AC170600.1-201ENSMUST00000228763 277 ntBASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Scaf1Q5U4C3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms