Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm23520-201ENSMUST00000093736 107 ntBASIC1.6□□□□□ -2.15
Trav3-1Q5R1I8 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.6□□□□□ -2.15
Trav3-1Q5R1I8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trav3-1Q5R1I8 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm37320-201ENSMUST00000192781 4953 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 n-R5s31-201ENSMUST00000104162 110 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm23530-201ENSMUST00000104564 137 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm4852-201ENSMUST00000121202 729 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm14709-201ENSMUST00000121225 304 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm8880-201ENSMUST00000121800 454 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm23225-201ENSMUST00000158121 114 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm22840-201ENSMUST00000158444 136 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm27392-201ENSMUST00000185041 101 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm7897-201ENSMUST00000193981 554 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm19202-201ENSMUST00000198096 808 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm18748-201ENSMUST00000198507 622 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm6590-201ENSMUST00000203343 687 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm3442-201ENSMUST00000216808 710 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Gm7065-201ENSMUST00000222150 474 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 AC140209.1-201ENSMUST00000227875 284 ntBASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav3-1Q5R1I8 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Trav3-1Q5R1I8 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm22151-201ENSMUST00000116963 58 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm16418-201ENSMUST00000118577 171 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm15067-201ENSMUST00000119534 156 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm6762-201ENSMUST00000121769 289 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm26020-201ENSMUST00000122729 183 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm24395-201ENSMUST00000158139 125 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm23112-201ENSMUST00000158606 125 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm16326-201ENSMUST00000162843 414 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Mir7058-201ENSMUST00000184637 75 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm28975-201ENSMUST00000186412 686 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm29408-201ENSMUST00000187536 216 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm28779-201ENSMUST00000189678 323 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm29330-201ENSMUST00000190032 699 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm28098-201ENSMUST00000191361 699 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm38281-201ENSMUST00000192301 315 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Igkv1-115-201ENSMUST00000198714 302 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm5885-202ENSMUST00000203357 528 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm45395-201ENSMUST00000209891 559 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm7380-201ENSMUST00000211599 466 ntBASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Trav3-1Q5R1I8 Gm45884-201ENSMUST00000209540 3416 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm43663-201ENSMUST00000198643 1505 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm23481-201ENSMUST00000104173 131 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm6274-201ENSMUST00000118173 797 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm12268-201ENSMUST00000118398 442 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm14795-201ENSMUST00000118461 471 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm11229-201ENSMUST00000121993 437 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm25572-201ENSMUST00000157527 172 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm25665-201ENSMUST00000157695 110 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm26915-201ENSMUST00000183080 748 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm29516-201ENSMUST00000190402 468 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm18529-201ENSMUST00000193025 1257 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm43724-201ENSMUST00000197516 226 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm17951-201ENSMUST00000198536 496 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm44611-201ENSMUST00000207507 355 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm45452-201ENSMUST00000210905 177 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 Gm18228-201ENSMUST00000217297 1091 ntBASIC1.57□□□□□ -2.16
Trav3-1Q5R1I8 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms