Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm7540-201ENSMUST00000219764 926 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm6369-201ENSMUST00000069626 412 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usp28Q5I043 Gm23847-201ENSMUST00000083829 110 ntBASIC3.1□□□□□ -1.91
Usp28Q5I043 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Usp28Q5I043 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp28Q5I043 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usp28Q5I043 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm11221-201ENSMUST00000117230 597 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm14506-201ENSMUST00000121165 536 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm13194-201ENSMUST00000142299 311 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm23380-201ENSMUST00000158448 103 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm23505-201ENSMUST00000158989 130 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm8161-201ENSMUST00000168739 481 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm8649-201ENSMUST00000181799 233 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm6501-201ENSMUST00000187178 916 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm5731-201ENSMUST00000190969 481 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm24350-202ENSMUST00000198309 132 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm44425-201ENSMUST00000203739 429 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Usp28Q5I043 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Usp28Q5I043 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Gm25403-201ENSMUST00000082971 143 ntBASIC3.09□□□□□ -1.91
Usp28Q5I043 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Usp28Q5I043 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
Usp28Q5I043 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
Usp28Q5I043 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Usp28Q5I043 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm25280-201ENSMUST00000157269 101 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm25883-201ENSMUST00000157781 271 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm6140-201ENSMUST00000192494 966 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm5322-201ENSMUST00000206142 699 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm8209-201ENSMUST00000206386 553 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm45551-201ENSMUST00000211459 928 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.08□□□□□ -1.92
Usp28Q5I043 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Usp28Q5I043 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Usp28Q5I043 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.08□□□□□ -1.92
Usp28Q5I043 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm25308-201ENSMUST00000104171 158 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm25500-201ENSMUST00000104426 123 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm8260-201ENSMUST00000119230 353 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm13059-201ENSMUST00000119881 398 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm12042-201ENSMUST00000120479 301 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm14989-201ENSMUST00000120497 207 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm22141-201ENSMUST00000157403 277 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm26005-201ENSMUST00000158802 134 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm38149-201ENSMUST00000191943 339 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm9632-201ENSMUST00000195934 643 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm43228-201ENSMUST00000200735 264 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm6112-201ENSMUST00000208037 629 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.07□□□□□ -1.92
Usp28Q5I043 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm6030-201ENSMUST00000078768 402 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Usp28Q5I043 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.07□□□□□ -1.92
Usp28Q5I043 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm11488-201ENSMUST00000117277 863 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm14677-201ENSMUST00000117866 486 ntBASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usp28Q5I043 Gm13502-201ENSMUST00000121574 684 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms