Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim40Q3UWA4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trim40Q3UWA4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Trim40Q3UWA4 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm24890-201ENSMUST00000104389 102 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm6587-201ENSMUST00000120219 613 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm23098-201ENSMUST00000157552 299 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm23775-201ENSMUST00000158991 249 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm16588-201ENSMUST00000162889 355 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm23648-201ENSMUST00000180301 107 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm26866-201ENSMUST00000180414 802 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm7870-201ENSMUST00000184467 616 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm43604-201ENSMUST00000199799 705 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm45379-201ENSMUST00000211772 549 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm19563-201ENSMUST00000222031 270 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm10038-201ENSMUST00000077233 441 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm23506-201ENSMUST00000083077 107 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm25008-201ENSMUST00000083809 81 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim40Q3UWA4 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Mir693-201ENSMUST00000102187 89 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm22493-201ENSMUST00000104494 132 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm12722-201ENSMUST00000118507 493 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm14566-201ENSMUST00000118915 321 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm12137-201ENSMUST00000119565 346 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm11693-201ENSMUST00000119625 565 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm22204-201ENSMUST00000122654 327 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm23112-201ENSMUST00000158606 125 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm10357-201ENSMUST00000159886 264 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm28002-201ENSMUST00000184832 100 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm42805-201ENSMUST00000196158 276 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm45796-201ENSMUST00000212483 114 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Gm12582-201ENSMUST00000030555 697 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trim40Q3UWA4 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm7123-201ENSMUST00000117647 213 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm11219-201ENSMUST00000118565 358 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm14899-201ENSMUST00000118673 548 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm12044-201ENSMUST00000120335 213 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm22613-201ENSMUST00000122679 292 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm5958-201ENSMUST00000147698 297 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm25058-201ENSMUST00000157365 128 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm10075-201ENSMUST00000162030 545 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Gm20612-201ENSMUST00000176318 236 ntBASIC3.13□□□□□ -1.91
Trim40Q3UWA4 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms