Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Mir693-201ENSMUST00000102187 89 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm13761-201ENSMUST00000117238 807 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm15195-201ENSMUST00000118775 263 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm12495-201ENSMUST00000119750 447 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm13717-201ENSMUST00000119868 365 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm12515-201ENSMUST00000120116 361 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm14101-201ENSMUST00000121502 473 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm26477-201ENSMUST00000122617 323 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm22718-201ENSMUST00000122701 315 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm26100-201ENSMUST00000157245 127 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm24720-201ENSMUST00000157518 166 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm23028-201ENSMUST00000158773 265 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm17030-201ENSMUST00000167016 393 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm20542-201ENSMUST00000174582 372 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Mir6993-201ENSMUST00000184912 65 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm28534-201ENSMUST00000187744 676 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm29516-201ENSMUST00000190402 468 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm37000-201ENSMUST00000193058 428 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm44348-201ENSMUST00000200165 122 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm18268-201ENSMUST00000208445 943 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm45860-201ENSMUST00000212700 334 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm30674-201ENSMUST00000214523 392 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trafd1Q3UDK1 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm22023-201ENSMUST00000104354 130 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm22960-201ENSMUST00000122517 104 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm16331-201ENSMUST00000144274 498 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm25413-201ENSMUST00000158544 312 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm21894-201ENSMUST00000179631 546 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm7948-201ENSMUST00000212607 844 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm10212-201ENSMUST00000087884 324 ntBASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Trafd1Q3UDK1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Mir208b-201ENSMUST00000104735 77 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm15854-201ENSMUST00000118879 808 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm13603-201ENSMUST00000119404 83 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm16017-201ENSMUST00000119834 208 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm11876-201ENSMUST00000120002 269 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm15157-201ENSMUST00000121852 702 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm14775-201ENSMUST00000122089 310 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm22107-201ENSMUST00000122548 100 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm17377-201ENSMUST00000165184 207 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm4479-201ENSMUST00000178807 171 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm28552-201ENSMUST00000190725 388 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm38333-201ENSMUST00000193608 604 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm37987-201ENSMUST00000194999 825 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm43704-201ENSMUST00000196164 496 ntBASIC3.11□□□□□ -1.91
Trafd1Q3UDK1 Gm19418-201ENSMUST00000197436 580 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms