Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ssrp1Q08943 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.68□□□□□ -1.66
Ssrp1Q08943 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Gm25512-201ENSMUST00000083863 107 ntBASIC4.68□□□□□ -1.66
Ssrp1Q08943 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.68□□□□□ -1.66
Ssrp1Q08943 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ssrp1Q08943 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm23226-201ENSMUST00000116927 103 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm8217-201ENSMUST00000119136 465 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm12137-201ENSMUST00000119565 346 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm16179-201ENSMUST00000120685 373 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm13511-201ENSMUST00000121167 363 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm11849-201ENSMUST00000121293 261 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm14678-201ENSMUST00000121396 482 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm26402-201ENSMUST00000158499 113 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm25534-201ENSMUST00000175365 125 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm23799-201ENSMUST00000175559 120 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm19147-201ENSMUST00000199622 652 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm7751-201ENSMUST00000212868 709 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm8785-201ENSMUST00000220259 487 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ssrp1Q08943 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.67□□□□□ -1.66
Ssrp1Q08943 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm14355-201ENSMUST00000117352 264 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm14890-201ENSMUST00000117660 676 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm5379-201ENSMUST00000120973 826 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm14333-201ENSMUST00000130484 264 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm20543-201ENSMUST00000174200 726 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm25019-201ENSMUST00000179732 110 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm21070-201ENSMUST00000182425 985 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm27899-201ENSMUST00000184715 64 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm29228-201ENSMUST00000185489 418 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm2950-201ENSMUST00000185530 520 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm8132-201ENSMUST00000204938 640 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Gm23404-201ENSMUST00000082543 97 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.66□□□□□ -1.66
Ssrp1Q08943 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ssrp1Q08943 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Ssrp1Q08943 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ssrp1Q08943 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.65□□□□□ -1.66
Ssrp1Q08943 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.65□□□□□ -1.66
Ssrp1Q08943 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Ssrp1Q08943 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ssrp1Q08943 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.65□□□□□ -1.66
Ssrp1Q08943 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Ssrp1Q08943 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm11698-201ENSMUST00000117948 455 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm11582-201ENSMUST00000121041 236 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm14638-201ENSMUST00000121338 216 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm24546-201ENSMUST00000158652 102 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm28263-201ENSMUST00000185884 400 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm28399-201ENSMUST00000186221 318 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm19503-201ENSMUST00000187109 241 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm28572-201ENSMUST00000187444 318 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Trbv24-201ENSMUST00000194614 347 ntBASIC4.65□□□□□ -1.67
Ssrp1Q08943 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms