Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24464-201ENSMUST00000179697 107 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm24137-201ENSMUST00000180055 79 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm22391-201ENSMUST00000180356 79 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm37338-201ENSMUST00000191986 127 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm37416-201ENSMUST00000193596 318 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm38098-201ENSMUST00000194115 241 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm44157-201ENSMUST00000204720 410 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm45119-201ENSMUST00000207612 199 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm44811-201ENSMUST00000209120 228 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.06□□□□□ -1.76
Col8a1Q00780 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm10038-201ENSMUST00000077233 441 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm10042-201ENSMUST00000079884 78 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm23848-201ENSMUST00000083826 106 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col8a1Q00780 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col8a1Q00780 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.06□□□□□ -1.76
Col8a1Q00780 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm23178-201ENSMUST00000116782 95 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm14107-201ENSMUST00000117774 330 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm15981-201ENSMUST00000119196 457 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm24858-201ENSMUST00000158058 323 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm22637-201ENSMUST00000158144 283 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm20660-201ENSMUST00000177515 289 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm27645-201ENSMUST00000183348 77 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm27688-201ENSMUST00000183634 91 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm27928-201ENSMUST00000183747 256 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm27254-201ENSMUST00000183926 517 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm27521-201ENSMUST00000184022 64 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm19193-201ENSMUST00000190263 590 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm29665-201ENSMUST00000191457 528 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm44543-201ENSMUST00000209136 396 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Col8a1Q00780 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm26329-201ENSMUST00000093723 110 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.05□□□□□ -1.76
Col8a1Q00780 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Col8a1Q00780 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col8a1Q00780 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col8a1Q00780 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm10552-201ENSMUST00000113396 372 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm12722-201ENSMUST00000118507 493 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm15012-201ENSMUST00000119176 106 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm25290-201ENSMUST00000122796 144 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm24402-201ENSMUST00000157873 91 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm24409-201ENSMUST00000157881 152 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm24175-201ENSMUST00000158931 129 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm8580-201ENSMUST00000160295 464 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm9022-202ENSMUST00000183285 483 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm27585-201ENSMUST00000183717 199 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm27747-201ENSMUST00000184707 85 ntBASIC4.04□□□□□ -1.76
Col8a1Q00780 Gm6075-201ENSMUST00000186816 486 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms