Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cdh11P55288 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm14835-201ENSMUST00000119039 315 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm11352-201ENSMUST00000119264 517 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm14570-201ENSMUST00000119444 391 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm12433-201ENSMUST00000119659 255 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm14815-201ENSMUST00000120060 488 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm14915-201ENSMUST00000120747 204 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm13602-201ENSMUST00000122405 493 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm23118-201ENSMUST00000122657 187 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdh11P55288 Gm22076-201ENSMUST00000158601 84 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm6625-201ENSMUST00000177870 272 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm23619-201ENSMUST00000178411 94 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm24897-201ENSMUST00000179033 107 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm25474-201ENSMUST00000179052 94 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm22047-201ENSMUST00000179176 94 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm8649-201ENSMUST00000181799 233 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm27919-201ENSMUST00000185163 107 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm18185-201ENSMUST00000186725 667 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm28594-201ENSMUST00000187022 661 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.32□□□□□ -1.88
Cdh11P55288 Gm46194-201ENSMUST00000218136 320 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdh11P55288 Gm2446-201ENSMUST00000220144 772 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdh11P55288 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh11P55288 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdh11P55288 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh11P55288 Snora70-201ENSMUST00000083047 137 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh11P55288 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.32□□□□□ -1.88
Cdh11P55288 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdh11P55288 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Cdh11P55288 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdh11P55288 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cdh11P55288 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cdh11P55288 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm24581-201ENSMUST00000103962 133 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm22771-201ENSMUST00000104449 91 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm15268-201ENSMUST00000118845 352 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm15177-201ENSMUST00000120491 577 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm15014-201ENSMUST00000120742 258 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm14768-201ENSMUST00000122126 678 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm23538-201ENSMUST00000157535 101 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm23257-201ENSMUST00000158322 132 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm22769-201ENSMUST00000158367 98 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm22840-201ENSMUST00000158444 136 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh11P55288 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cdh11P55288 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm20693-201ENSMUST00000177431 211 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm22584-201ENSMUST00000177935 92 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm28802-201ENSMUST00000188624 944 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm29704-201ENSMUST00000196011 253 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm38395-201ENSMUST00000199904 830 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.31□□□□□ -1.88
Cdh11P55288 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Gm18116-201ENSMUST00000220920 537 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 CT010480.1-201ENSMUST00000223612 363 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh11P55288 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh11P55288 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Cdh11P55288 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm16261-201ENSMUST00000096813 205 ntBASIC3.31□□□□□ -1.88
Cdh11P55288 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh11P55288 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cdh11P55288 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh11P55288 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.3□□□□□ -1.88
Cdh11P55288 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cdh11P55288 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdh11P55288 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdh11P55288 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdh11P55288 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdh11P55288 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Cdh11P55288 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms