Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Rfx1P48377 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Rfx1P48377 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Rfx1P48377 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Rfx1P48377 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm12876-201ENSMUST00000120975 408 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm6956-201ENSMUST00000134724 546 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm25389-201ENSMUST00000157340 286 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm23700-201ENSMUST00000158842 102 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm24168-201ENSMUST00000178825 107 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Mir7006-201ENSMUST00000183624 69 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm28995-201ENSMUST00000186625 261 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm20923-201ENSMUST00000190009 319 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.48□□□□□ -1.53
Rfx1P48377 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm23514-201ENSMUST00000082827 130 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm23650-201ENSMUST00000083355 70 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Mir188-201ENSMUST00000083464 68 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Rfx1P48377 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Rfx1P48377 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Rfx1P48377 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.48□□□□□ -1.53
Rfx1P48377 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Rfx1P48377 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Rfx1P48377 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rfx1P48377 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rfx1P48377 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rfx1P48377 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rfx1P48377 Mir676-201ENSMUST00000102443 89 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Rfx1P48377 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm11432-201ENSMUST00000117334 231 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Rfx1P48377 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rfx1P48377 Gm22263-201ENSMUST00000180060 104 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Mir6344-201ENSMUST00000183462 104 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Rfx1P48377 Gm29062-201ENSMUST00000186032 694 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm29352-201ENSMUST00000188054 544 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm29454-201ENSMUST00000190805 393 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm45660-201ENSMUST00000210267 151 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm18904-201ENSMUST00000218756 329 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rfx1P48377 Gm22974-201ENSMUST00000083301 103 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rfx1P48377 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rfx1P48377 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.47□□□□□ -1.53
Rfx1P48377 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rfx1P48377 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.47□□□□□ -1.53
Rfx1P48377 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Rfx1P48377 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rfx1P48377 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Rfx1P48377 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.46□□□□□ -1.53
Rfx1P48377 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Rfx1P48377 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Rfx1P48377 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Rfx1P48377 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.46□□□□□ -1.53
Rfx1P48377 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Rfx1P48377 Gm26147-201ENSMUST00000104479 114 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Snord98-201ENSMUST00000116819 65 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm14269-201ENSMUST00000120455 306 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm23214-201ENSMUST00000122716 157 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm6969-201ENSMUST00000140065 342 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm7953-201ENSMUST00000168278 469 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Mir7012-201ENSMUST00000183900 64 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm37128-201ENSMUST00000192599 232 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm36259-201ENSMUST00000197340 392 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm43724-201ENSMUST00000197516 226 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Rfx1P48377 Gm45032-201ENSMUST00000205375 520 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Gm45498-201ENSMUST00000210346 283 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.46□□□□□ -1.54
Rfx1P48377 Gm46138-201ENSMUST00000215294 426 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Rfx1P48377 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rfx1P48377 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Rfx1P48377 Olfr713-201ENSMUST00000098139 975 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rfx1P48377 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Rfx1P48377 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.46□□□□□ -1.54
Rfx1P48377 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms