Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mir592-201ENSMUST00000102113 96 ntBASIC2.29□□□□□ -2.04
HttP42859 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.29□□□□□ -2.04
HttP42859 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.29□□□□□ -2.04
HttP42859 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
HttP42859 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HttP42859 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HttP42859 Gm11890-201ENSMUST00000119585 417 ntBASIC2.29□□□□□ -2.04
HttP42859 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.29□□□□□ -2.04
HttP42859 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.29□□□□□ -2.04
HttP42859 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HttP42859 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HttP42859 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HttP42859 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.29□□□□□ -2.04
HttP42859 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HttP42859 Gm24342-201ENSMUST00000103907 104 ntBASIC2.28□□□□□ -2.04
HttP42859 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HttP42859 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Gm27326-201ENSMUST00000183504 95 ntBASIC2.28□□□□□ -2.04
HttP42859 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.28□□□□□ -2.04
HttP42859 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC2.28□□□□□ -2.04
HttP42859 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC2.28□□□□□ -2.04
HttP42859 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
HttP42859 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.28□□□□□ -2.04
HttP42859 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Gm21991-201ENSMUST00000180006 508 ntBASIC2.28□□□□□ -2.04
HttP42859 Gm44376-201ENSMUST00000197570 128 ntBASIC2.28□□□□□ -2.04
HttP42859 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Gm18346-201ENSMUST00000216782 325 ntBASIC2.28□□□□□ -2.04
HttP42859 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HttP42859 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HttP42859 Gm22891-201ENSMUST00000158641 164 ntBASIC2.28□□□□□ -2.04
HttP42859 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.28□□□□□ -2.04
HttP42859 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.28□□□□□ -2.04
HttP42859 Gm43911-201ENSMUST00000203097 76 ntBASIC2.28□□□□□ -2.04
HttP42859 Gm44083-201ENSMUST00000203114 337 ntBASIC2.28□□□□□ -2.04
HttP42859 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.28□□□□□ -2.04
HttP42859 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
HttP42859 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.28□□□□□ -2.05
HttP42859 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
HttP42859 Gm25910-201ENSMUST00000157620 140 ntBASIC2.27□□□□□ -2.05
HttP42859 Gm25831-201ENSMUST00000158924 163 ntBASIC2.27□□□□□ -2.05
HttP42859 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
HttP42859 Mir6394-201ENSMUST00000184738 99 ntBASIC2.27□□□□□ -2.05
HttP42859 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HttP42859 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HttP42859 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
HttP42859 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HttP42859 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.27□□□□□ -2.05
HttP42859 Gm43596-201ENSMUST00000202818 884 ntBASIC2.27□□□□□ -2.05
HttP42859 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HttP42859 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.27□□□□□ -2.05
HttP42859 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.27□□□□□ -2.05
HttP42859 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HttP42859 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HttP42859 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HttP42859 Gm26082-201ENSMUST00000104070 127 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm26421-201ENSMUST00000104279 132 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm24771-201ENSMUST00000158508 137 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm6501-201ENSMUST00000187178 916 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm2691-201ENSMUST00000203205 901 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm8031-201ENSMUST00000213430 626 ntBASIC2.26□□□□□ -2.05
HttP42859 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
HttP42859 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.26□□□□□ -2.05
HttP42859 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HttP42859 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC2.26□□□□□ -2.05
HttP42859 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HttP42859 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.26□□□□□ -2.05
HttP42859 Gm12432-201ENSMUST00000119540 186 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm25470-201ENSMUST00000175576 111 ntBASIC2.26□□□□□ -2.05
HttP42859 Gm5900-201ENSMUST00000179862 375 ntBASIC2.26□□□□□ -2.05
HttP42859 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.26□□□□□ -2.05
HttP42859 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.26□□□□□ -2.05
HttP42859 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.26□□□□□ -2.05
HttP42859 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.26□□□□□ -2.05
HttP42859 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
HttP42859 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HttP42859 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.26□□□□□ -2.05
HttP42859 Gm26983-201ENSMUST00000182051 388 ntBASIC2.26□□□□□ -2.05
HttP42859 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.26□□□□□ -2.05
HttP42859 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC2.26□□□□□ -2.05
HttP42859 AC158536.1-201ENSMUST00000222510 256 ntBASIC2.26□□□□□ -2.05
HttP42859 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HttP42859 Gm24445-201ENSMUST00000083981 107 ntBASIC2.26□□□□□ -2.05
HttP42859 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HttP42859 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HttP42859 Gm13024-201ENSMUST00000121756 718 ntBASIC2.25□□□□□ -2.05
HttP42859 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC2.25□□□□□ -2.05
HttP42859 Gm22093-201ENSMUST00000158980 111 ntBASIC2.25□□□□□ -2.05
HttP42859 AC130536.1-201ENSMUST00000224425 271 ntBASIC2.25□□□□□ -2.05
HttP42859 Gm22228-201ENSMUST00000157364 101 ntBASIC2.25□□□□□ -2.05
HttP42859 Gm22316-201ENSMUST00000158012 216 ntBASIC2.25□□□□□ -2.05
HttP42859 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HttP42859 Gm36247-201ENSMUST00000211834 285 ntBASIC2.25□□□□□ -2.05
HttP42859 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
HttP42859 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.25□□□□□ -2.05
HttP42859 Gm25813-201ENSMUST00000082748 191 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms