Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lig1P37913 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.51□□□□□ -1.69
Lig1P37913 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm24318-201ENSMUST00000104490 131 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Lig1P37913 Gm14574-201ENSMUST00000120644 279 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm6373-201ENSMUST00000121026 360 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm14564-201ENSMUST00000122159 294 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.51□□□□□ -1.69
Lig1P37913 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lig1P37913 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Mir6393-201ENSMUST00000183709 94 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm27161-201ENSMUST00000183960 562 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm28785-201ENSMUST00000187478 379 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm28924-201ENSMUST00000190012 241 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm37239-201ENSMUST00000193510 141 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm29704-201ENSMUST00000196011 253 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.51□□□□□ -1.69
Lig1P37913 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lig1P37913 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.51□□□□□ -1.69
Lig1P37913 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.51□□□□□ -1.69
Lig1P37913 AC163295.1-201ENSMUST00000227840 314 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lig1P37913 Gm22868-201ENSMUST00000083955 164 ntBASIC4.51□□□□□ -1.69
Lig1P37913 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lig1P37913 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lig1P37913 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lig1P37913 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Lig1P37913 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Lig1P37913 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Lig1P37913 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lig1P37913 Gm22472-201ENSMUST00000104115 134 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Lig1P37913 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 Gm15148-201ENSMUST00000117602 156 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm13804-201ENSMUST00000119552 172 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm11830-201ENSMUST00000120175 561 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm5287-201ENSMUST00000120666 598 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm14915-201ENSMUST00000120747 204 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm11403-201ENSMUST00000122195 369 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm13852-201ENSMUST00000122350 242 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.5□□□□□ -1.69
Lig1P37913 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lig1P37913 Gm22792-201ENSMUST00000157225 133 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm25572-201ENSMUST00000157527 172 ntBASIC4.5□□□□□ -1.69
Lig1P37913 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lig1P37913 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm26746-201ENSMUST00000181722 487 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm45232-201ENSMUST00000207811 162 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm6112-201ENSMUST00000208037 629 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.5□□□□□ -1.69
Lig1P37913 Olfr936-202ENSMUST00000216912 937 ntBASIC4.5□□□□□ -1.69
Lig1P37913 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm2446-201ENSMUST00000220144 772 ntBASIC4.5□□□□□ -1.69
Lig1P37913 AC116589.3-202ENSMUST00000221770 649 ntBASIC4.5□□□□□ -1.69
Lig1P37913 AC116589.6-201ENSMUST00000222252 649 ntBASIC4.5□□□□□ -1.69
Lig1P37913 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lig1P37913 mt-Td-201ENSMUST00000082404 70 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Gm25481-201ENSMUST00000083221 158 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Snord38a-201ENSMUST00000083746 71 ntBASIC4.5□□□□□ -1.69
Lig1P37913 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lig1P37913 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Lig1P37913 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.49□□□□□ -1.69
Lig1P37913 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lig1P37913 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lig1P37913 Gm13664-201ENSMUST00000117304 345 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm15783-201ENSMUST00000117521 633 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm14586-201ENSMUST00000119571 408 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm22480-201ENSMUST00000122568 128 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.49□□□□□ -1.69
Lig1P37913 Gm11281-201ENSMUST00000141391 576 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm22563-201ENSMUST00000157333 269 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm25436-201ENSMUST00000158275 145 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm17538-201ENSMUST00000168236 327 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm22716-201ENSMUST00000177596 107 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Spin2g-201ENSMUST00000178425 687 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm22631-201ENSMUST00000179656 94 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.49□□□□□ -1.69
Lig1P37913 Gm43043-201ENSMUST00000196579 412 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.49□□□□□ -1.69
Lig1P37913 Gm42475-201ENSMUST00000201212 295 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms