Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RaraP11416 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RaraP11416 Gm13153-201ENSMUST00000120969 637 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm22059-201ENSMUST00000157544 104 ntBASIC5.13□□□□□ -1.59
RaraP11416 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm20698-201ENSMUST00000175657 233 ntBASIC5.13□□□□□ -1.59
RaraP11416 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.13□□□□□ -1.59
RaraP11416 Gm25019-201ENSMUST00000179732 110 ntBASIC5.13□□□□□ -1.59
RaraP11416 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm5058-201ENSMUST00000187331 463 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm37568-201ENSMUST00000191755 364 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.13□□□□□ -1.59
RaraP11416 Gm18384-201ENSMUST00000195974 808 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.13□□□□□ -1.59
RaraP11416 Gm2522-201ENSMUST00000204280 322 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm45660-201ENSMUST00000210267 151 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm45815-201ENSMUST00000220241 146 ntBASIC5.13□□□□□ -1.59
RaraP11416 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.13□□□□□ -1.59
RaraP11416 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.13□□□□□ -1.59
RaraP11416 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RaraP11416 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
RaraP11416 Gm25140-201ENSMUST00000083254 140 ntBASIC5.13□□□□□ -1.59
RaraP11416 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.13□□□□□ -1.59
RaraP11416 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RaraP11416 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RaraP11416 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RaraP11416 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RaraP11416 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.12□□□□□ -1.59
RaraP11416 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RaraP11416 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.12□□□□□ -1.59
RaraP11416 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Gm14296-202ENSMUST00000108931 750 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm15603-201ENSMUST00000119252 492 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm14520-201ENSMUST00000119258 387 ntBASIC5.12□□□□□ -1.59
RaraP11416 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.12□□□□□ -1.59
RaraP11416 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.12□□□□□ -1.59
RaraP11416 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm23829-201ENSMUST00000157392 270 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm22084-201ENSMUST00000157585 105 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm25333-201ENSMUST00000158035 246 ntBASIC5.12□□□□□ -1.59
RaraP11416 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm16232-201ENSMUST00000162856 167 ntBASIC5.12□□□□□ -1.59
RaraP11416 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm5139-201ENSMUST00000175943 249 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm20660-201ENSMUST00000177515 289 ntBASIC5.12□□□□□ -1.59
RaraP11416 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm44513-201ENSMUST00000206811 439 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm18306-201ENSMUST00000207338 569 ntBASIC5.12□□□□□ -1.59
RaraP11416 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.12□□□□□ -1.59
RaraP11416 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.12□□□□□ -1.59
RaraP11416 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm23845-201ENSMUST00000083834 152 ntBASIC5.12□□□□□ -1.59
RaraP11416 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.12□□□□□ -1.59
RaraP11416 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.12□□□□□ -1.59
RaraP11416 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.12□□□□□ -1.59
RaraP11416 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.12□□□□□ -1.59
RaraP11416 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RaraP11416 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RaraP11416 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.11□□□□□ -1.59
RaraP11416 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
RaraP11416 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RaraP11416 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
RaraP11416 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.11□□□□□ -1.59
RaraP11416 Gm23422-201ENSMUST00000102000 107 ntBASIC5.11□□□□□ -1.59
RaraP11416 Mir592-201ENSMUST00000102113 96 ntBASIC5.11□□□□□ -1.59
RaraP11416 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RaraP11416 Mir1188-201ENSMUST00000116756 120 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms