Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm9785-202ENSMUST00000144563 593 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm5958-201ENSMUST00000147698 297 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm7346-201ENSMUST00000169661 476 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29299-201ENSMUST00000185609 923 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29573-201ENSMUST00000190291 919 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm7142-201ENSMUST00000194232 586 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm19177-201ENSMUST00000204520 613 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm44157-201ENSMUST00000204720 410 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm45226-201ENSMUST00000206602 288 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm44600-201ENSMUST00000208540 111 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm45072-201ENSMUST00000208673 929 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm23615-201ENSMUST00000082602 65 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.15□□□□□ -1.91
Chmp6P0C0A3 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm16171-201ENSMUST00000118004 324 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm15399-201ENSMUST00000118055 724 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm13443-201ENSMUST00000120770 555 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm16111-201ENSMUST00000162128 285 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm28011-201ENSMUST00000184097 175 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm43104-201ENSMUST00000197234 311 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm18660-201ENSMUST00000199542 629 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm44425-201ENSMUST00000203739 429 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.14□□□□□ -1.91
Chmp6P0C0A3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.14□□□□□ -1.91
Chmp6P0C0A3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms