Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm25919-201ENSMUST00000104271 132 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm22496-201ENSMUST00000104493 88 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm23839-201ENSMUST00000116957 109 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm12550-201ENSMUST00000118478 329 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm7079-201ENSMUST00000119726 171 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm12237-201ENSMUST00000120158 470 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm9003-201ENSMUST00000121810 482 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm22613-201ENSMUST00000122679 292 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm22027-201ENSMUST00000122737 127 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm23233-201ENSMUST00000157301 137 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm20526-201ENSMUST00000173416 158 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm23631-201ENSMUST00000175291 123 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Mir6335-201ENSMUST00000184081 98 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Mir7687-201ENSMUST00000184722 59 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm28683-201ENSMUST00000187134 615 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm28840-205ENSMUST00000189320 615 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm28835-203ENSMUST00000190062 615 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm29218-205ENSMUST00000190846 615 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm44092-201ENSMUST00000204470 258 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.31□□□□□ -1.72
Hoxd3P09027 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Hoxd3P09027 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Hoxd3P09027 Gm43437-201ENSMUST00000198535 3955 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Hoxd3P09027 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm6134-201ENSMUST00000117265 171 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm23982-201ENSMUST00000157141 106 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm23642-201ENSMUST00000157858 258 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm23044-201ENSMUST00000157891 100 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm22098-201ENSMUST00000157930 85 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm22447-201ENSMUST00000158155 92 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm25906-201ENSMUST00000158489 126 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm27535-201ENSMUST00000183814 157 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Mir6417-201ENSMUST00000183815 116 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Mir6372-201ENSMUST00000185114 109 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm30341-201ENSMUST00000194363 289 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm43828-201ENSMUST00000196890 639 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm18325-201ENSMUST00000203228 835 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm44108-201ENSMUST00000203525 422 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm7468-201ENSMUST00000203900 652 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm45007-201ENSMUST00000206237 366 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.3□□□□□ -1.72
Hoxd3P09027 AC168880.2-201ENSMUST00000224488 201 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm25698-201ENSMUST00000082897 107 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Hoxd3P09027 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.3□□□□□ -1.72
Hoxd3P09027 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Hoxd3P09027 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Hoxd3P09027 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms