Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col3a1P08121 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col3a1P08121 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm2348-201ENSMUST00000108782 300 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm24635-201ENSMUST00000122712 128 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm24787-201ENSMUST00000157380 123 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm22852-201ENSMUST00000177899 101 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm29045-201ENSMUST00000187278 698 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm18357-201ENSMUST00000188184 580 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm2979-201ENSMUST00000193442 463 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.85□□□□□ -1.79
Col3a1P08121 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm7495-201ENSMUST00000215099 426 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC3.85□□□□□ -1.79
Col3a1P08121 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.85□□□□□ -1.79
Col3a1P08121 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm25004-201ENSMUST00000083811 161 ntBASIC3.85□□□□□ -1.79
Col3a1P08121 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col3a1P08121 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col3a1P08121 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.84□□□□□ -1.79
Col3a1P08121 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col3a1P08121 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col3a1P08121 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col3a1P08121 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.84□□□□□ -1.79
Col3a1P08121 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col3a1P08121 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col3a1P08121 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm11798-201ENSMUST00000119150 421 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm14366-201ENSMUST00000121970 730 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm25553-201ENSMUST00000158076 79 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm7346-201ENSMUST00000169661 476 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm27762-201ENSMUST00000183417 109 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm27905-201ENSMUST00000184005 207 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm29460-201ENSMUST00000188607 714 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col3a1P08121 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm7837-201ENSMUST00000190873 412 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm36638-201ENSMUST00000193295 400 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Mir7118-201ENSMUST00000197760 61 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm36382-201ENSMUST00000198892 541 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm43171-201ENSMUST00000199882 291 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm19126-201ENSMUST00000207896 509 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.84□□□□□ -1.8
Col3a1P08121 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.84□□□□□ -1.8
Col3a1P08121 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.8
Col3a1P08121 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.84□□□□□ -1.8
Col3a1P08121 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Col3a1P08121 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col3a1P08121 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Col3a1P08121 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col3a1P08121 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.83□□□□□ -1.8
Col3a1P08121 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Col3a1P08121 Mir1195-201ENSMUST00000116818 98 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm14939-201ENSMUST00000120347 680 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm23981-201ENSMUST00000157136 106 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm24720-201ENSMUST00000157518 166 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm23852-201ENSMUST00000158376 77 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm23025-201ENSMUST00000158769 111 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm22532-201ENSMUST00000158822 140 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Mir1264-201ENSMUST00000175381 86 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Mir6951-201ENSMUST00000183910 75 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.83□□□□□ -1.8
Col3a1P08121 Gm37889-201ENSMUST00000194174 251 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm38019-201ENSMUST00000195133 380 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm33973-201ENSMUST00000195148 534 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm43228-201ENSMUST00000200735 264 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm29809-201ENSMUST00000218423 493 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Gm4921-201ENSMUST00000219804 992 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.83□□□□□ -1.8
Col3a1P08121 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.83□□□□□ -1.8
Col3a1P08121 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col3a1P08121 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col3a1P08121 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col3a1P08121 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col3a1P08121 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms