Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm44060-201ENSMUST00000204440 410 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm44092-201ENSMUST00000204470 258 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm19232-201ENSMUST00000211621 652 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Gm9472-201ENSMUST00000221625 526 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc4O35988 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.52□□□□□ -2.01
Sdc4O35988 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc4O35988 Gm15282-201ENSMUST00000117707 300 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm15025-201ENSMUST00000118434 418 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm12443-201ENSMUST00000122308 323 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm25945-201ENSMUST00000122484 135 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc4O35988 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc4O35988 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc4O35988 Gm23599-201ENSMUST00000157261 251 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm24436-201ENSMUST00000157889 302 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc4O35988 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc4O35988 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc4O35988 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc4O35988 Gm28788-201ENSMUST00000189717 375 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm29558-201ENSMUST00000190134 375 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.51□□□□□ -2.01
Sdc4O35988 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc4O35988 Gm23407-201ENSMUST00000082538 91 ntBASIC2.51□□□□□ -2.01
Sdc4O35988 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.51□□□□□ -2.01
Sdc4O35988 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc4O35988 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sdc4O35988 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sdc4O35988 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm22752-201ENSMUST00000102083 109 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm26015-201ENSMUST00000104402 125 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm25529-201ENSMUST00000104850 92 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm13329-201ENSMUST00000117063 265 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm13880-201ENSMUST00000118421 474 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm12448-201ENSMUST00000118852 655 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.5□□□□□ -2.01
Sdc4O35988 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sdc4O35988 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Mir7068-201ENSMUST00000183439 74 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm37533-201ENSMUST00000193848 545 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Mir6925-201ENSMUST00000197857 70 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.5□□□□□ -2.01
Sdc4O35988 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.5□□□□□ -2.01
Sdc4O35988 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sdc4O35988 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Sdc4O35988 Gm23455-201ENSMUST00000083331 100 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sdc4O35988 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.5□□□□□ -2.01
Sdc4O35988 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc4O35988 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc4O35988 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc4O35988 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sdc4O35988 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.49□□□□□ -2.01
Sdc4O35988 Gm14469-201ENSMUST00000118363 202 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 Gm7209-201ENSMUST00000122339 333 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc4O35988 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Sdc4O35988 Gm28802-201ENSMUST00000188624 944 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.49□□□□□ -2.01
Sdc4O35988 Gm43090-201ENSMUST00000202459 314 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 Gm45689-201ENSMUST00000210522 133 ntBASIC2.49□□□□□ -2.01
Sdc4O35988 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Sdc4O35988 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc4O35988 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sdc4O35988 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc4O35988 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Sdc4O35988 Gm26342-201ENSMUST00000104557 129 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc4O35988 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Gm12803-201ENSMUST00000118907 821 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Gm22730-201ENSMUST00000158085 171 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.48□□□□□ -2.01
Sdc4O35988 Gm3852-201ENSMUST00000182781 264 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Gm29553-201ENSMUST00000189692 279 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Gm37866-201ENSMUST00000191950 696 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sdc4O35988 Gm42625-201ENSMUST00000198611 922 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Gm29884-201ENSMUST00000218403 453 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sdc4O35988 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.48□□□□□ -2.01
Sdc4O35988 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Sdc4O35988 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc4O35988 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.47□□□□□ -2.01
Sdc4O35988 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.47□□□□□ -2.01
Sdc4O35988 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sdc4O35988 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms