Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm29413-201ENSMUST00000186019 880 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Clk3O35492 Gm29639-201ENSMUST00000188375 580 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Gm19243-201ENSMUST00000198592 269 ntBASIC3.66□□□□□ -1.82
Clk3O35492 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Clk3O35492 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.66□□□□□ -1.82
Clk3O35492 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.66□□□□□ -1.82
Clk3O35492 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.66□□□□□ -1.82
Clk3O35492 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.66□□□□□ -1.82
Clk3O35492 Gm23097-201ENSMUST00000083448 105 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.66□□□□□ -1.82
Clk3O35492 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Clk3O35492 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clk3O35492 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clk3O35492 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Clk3O35492 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Clk3O35492 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Clk3O35492 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Clk3O35492 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Clk3O35492 Gm23697-201ENSMUST00000103897 110 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm24281-201ENSMUST00000104234 136 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm11490-201ENSMUST00000118128 272 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm11359-201ENSMUST00000120039 567 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm12825-201ENSMUST00000120249 563 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm7308-201ENSMUST00000121087 447 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm13406-201ENSMUST00000121991 256 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm22816-201ENSMUST00000157450 117 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Clk3O35492 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.65□□□□□ -1.83
Clk3O35492 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm29647-201ENSMUST00000188795 666 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm28504-201ENSMUST00000190977 666 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.65□□□□□ -1.83
Clk3O35492 Gm35843-201ENSMUST00000193716 666 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm7449-201ENSMUST00000194393 663 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm44295-201ENSMUST00000203805 437 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm45232-201ENSMUST00000207811 162 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm6929-201ENSMUST00000210930 468 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm18507-201ENSMUST00000218855 525 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Clk3O35492 Gm23518-201ENSMUST00000082835 153 ntBASIC3.65□□□□□ -1.83
Clk3O35492 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Clk3O35492 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Clk3O35492 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Clk3O35492 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Clk3O35492 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.65□□□□□ -1.83
Clk3O35492 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Clk3O35492 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Clk3O35492 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Clk3O35492 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Clk3O35492 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.64□□□□□ -1.83
Clk3O35492 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Clk3O35492 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Clk3O35492 Gm4736-201ENSMUST00000100870 380 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Clk3O35492 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Clk3O35492 Gm22269-201ENSMUST00000104002 130 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm23744-201ENSMUST00000104231 149 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm11718-201ENSMUST00000119942 537 ntBASIC3.64□□□□□ -1.83
Clk3O35492 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Clk3O35492 Gm15946-201ENSMUST00000160654 423 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm27535-201ENSMUST00000183814 157 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm27957-201ENSMUST00000184054 127 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Mir3620-201ENSMUST00000184710 61 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm44887-201ENSMUST00000208980 178 ntBASIC3.64□□□□□ -1.83
Clk3O35492 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.64□□□□□ -1.83
Clk3O35492 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.64□□□□□ -1.83
Clk3O35492 Gm8785-201ENSMUST00000220259 487 ntBASIC3.64□□□□□ -1.83
Clk3O35492 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.64□□□□□ -1.83
Clk3O35492 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.64□□□□□ -1.83
Clk3O35492 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Clk3O35492 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Clk3O35492 Gm7984-201ENSMUST00000060640 538 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Clk3O35492 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Clk3O35492 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Clk3O35492 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.64□□□□□ -1.83
Clk3O35492 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Clk3O35492 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Clk3O35492 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.63□□□□□ -1.83
Clk3O35492 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Clk3O35492 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.63□□□□□ -1.83
Clk3O35492 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Clk3O35492 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.63□□□□□ -1.83
Clk3O35492 Mir690-201ENSMUST00000102110 109 ntBASIC3.63□□□□□ -1.83
Clk3O35492 Gm24544-201ENSMUST00000103862 110 ntBASIC3.63□□□□□ -1.83
Clk3O35492 Gm24125-201ENSMUST00000104105 137 ntBASIC3.63□□□□□ -1.83
Clk3O35492 Gm11566-201ENSMUST00000118550 203 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms