Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mir3087-201ENSMUST00000199405 56 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm18453-201ENSMUST00000208000 626 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.88□□□□□ -2.11
Col6a4A2AX52 Gm18557-201ENSMUST00000218710 433 ntBASIC1.88□□□□□ -2.11
Col6a4A2AX52 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Gm27796-201ENSMUST00000183863 261 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 Gm27636-201ENSMUST00000184528 122 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 Gm3496-201ENSMUST00000188283 745 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 Gm37579-201ENSMUST00000194291 142 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 Gm18043-201ENSMUST00000216741 739 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 AC167013.2-202ENSMUST00000227035 333 ntBASIC1.87□□□□□ -2.11
Col6a4A2AX52 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Col6a4A2AX52 Gm15162-201ENSMUST00000119325 283 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Mir7039-201ENSMUST00000183852 85 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm45678-201ENSMUST00000210509 295 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm15148-201ENSMUST00000117602 156 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm15399-201ENSMUST00000118055 724 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm12607-201ENSMUST00000120724 493 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm23897-201ENSMUST00000158110 158 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Ear-ps7-201ENSMUST00000161287 442 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm24317-201ENSMUST00000178536 107 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm43922-201ENSMUST00000205071 328 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 CT030135.1-201ENSMUST00000223760 570 ntBASIC1.86□□□□□ -2.11
Col6a4A2AX52 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.86□□□□□ -2.11
Col6a4A2AX52 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm26354-201ENSMUST00000158221 129 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Mir222-201ENSMUST00000083537 79 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a4A2AX52 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm14880-201ENSMUST00000117581 292 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm16569-201ENSMUST00000160526 314 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm36962-201ENSMUST00000192114 1761 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm37965-201ENSMUST00000195304 1362 ntBASIC1.85□□□□□ -2.11
Col6a4A2AX52 Gm15773-201ENSMUST00000118665 1448 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm24889-201ENSMUST00000104388 132 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm23229-201ENSMUST00000157297 105 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm24010-201ENSMUST00000157731 282 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm25025-201ENSMUST00000175018 111 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm21991-201ENSMUST00000180006 508 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm26864-201ENSMUST00000181346 156 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Mir6901-201ENSMUST00000185062 62 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm5268-201ENSMUST00000189212 940 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Gm2142-201ENSMUST00000197899 589 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 AL603834.1-201ENSMUST00000198372 121 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 AC079644.1-201ENSMUST00000220586 405 ntBASIC1.84□□□□□ -2.11
Col6a4A2AX52 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Col6a4A2AX52 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col6a4A2AX52 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
Col6a4A2AX52 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Col6a4A2AX52 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Col6a4A2AX52 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.84□□□□□ -2.12
Col6a4A2AX52 Trav20-201ENSMUST00000142754 347 ntBASIC1.84□□□□□ -2.12
Col6a4A2AX52 Gm24858-201ENSMUST00000158058 323 ntBASIC1.84□□□□□ -2.12
Col6a4A2AX52 Gm22416-201ENSMUST00000158590 88 ntBASIC1.84□□□□□ -2.12
Col6a4A2AX52 Gm25119-201ENSMUST00000158815 88 ntBASIC1.84□□□□□ -2.12
Col6a4A2AX52 Gm18448-201ENSMUST00000186286 599 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms