Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm8580-201ENSMUST00000160295 464 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm16490-201ENSMUST00000165299 351 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm28011-201ENSMUST00000184097 175 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm27399-201ENSMUST00000184250 78 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm19257-201ENSMUST00000186121 183 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm37377-201ENSMUST00000191733 304 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Mir127-201ENSMUST00000093568 70 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm16017-201ENSMUST00000119834 208 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm11797-201ENSMUST00000121336 754 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm26411-201ENSMUST00000157668 107 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm21827-201ENSMUST00000178247 423 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Mir6363-201ENSMUST00000184880 114 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm18602-201ENSMUST00000209794 851 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm18645-202ENSMUST00000212222 760 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Gm23975-201ENSMUST00000082685 106 ntBASIC2.8□□□□□ -1.96
Scn3aA2ASI5 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Gm11575-201ENSMUST00000122243 228 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Gm22227-201ENSMUST00000157356 259 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Gm18415-201ENSMUST00000177464 647 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Mir6925-201ENSMUST00000197857 70 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Scn3aA2ASI5 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Snord14c-201ENSMUST00000101927 86 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm23551-201ENSMUST00000116852 121 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm14771-201ENSMUST00000118249 203 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm16533-201ENSMUST00000140035 228 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm26622-201ENSMUST00000180520 298 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Mir6393-201ENSMUST00000183709 94 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm17937-201ENSMUST00000197908 742 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm42828-201ENSMUST00000199669 469 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm44903-201ENSMUST00000206840 130 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Gm6796-201ENSMUST00000211919 243 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Scn3aA2ASI5 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm14125-201ENSMUST00000113442 680 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm15854-201ENSMUST00000118879 808 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm13862-201ENSMUST00000121220 197 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm12313-201ENSMUST00000121347 421 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm24061-201ENSMUST00000157489 120 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm28637-201ENSMUST00000179424 345 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Mir7014-201ENSMUST00000183853 63 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm18043-201ENSMUST00000216741 739 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.78□□□□□ -1.97
Scn3aA2ASI5 Gm24917-201ENSMUST00000083935 104 ntBASIC2.78□□□□□ -1.97
Scn3aA2ASI5 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm22750-201ENSMUST00000102076 103 ntBASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm12105-201ENSMUST00000120846 779 ntBASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm24436-201ENSMUST00000157889 302 ntBASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm22664-201ENSMUST00000158719 105 ntBASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Scn3aA2ASI5 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 192.1 ms