Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Gm29740-201ENSMUST00000193182 655 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Gm43405-201ENSMUST00000198642 337 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 Gm44594-201ENSMUST00000208982 407 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 Gm18645-201ENSMUST00000209593 651 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav12-2A0N8N6 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav12-2A0N8N6 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Gm24928-201ENSMUST00000083399 107 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 Gm25897-201ENSMUST00000083709 107 ntBASIC2.53□□□□□ -2
Trav12-2A0N8N6 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav12-2A0N8N6 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm12954-201ENSMUST00000118610 611 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm15193-201ENSMUST00000120224 865 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm15272-201ENSMUST00000120865 233 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm23886-201ENSMUST00000122684 313 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm6265-201ENSMUST00000149263 231 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm24190-201ENSMUST00000157976 216 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm24876-201ENSMUST00000158780 92 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm23415-201ENSMUST00000175519 83 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm26991-201ENSMUST00000180950 620 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Mir6408-201ENSMUST00000183643 91 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm5268-201ENSMUST00000189212 940 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm43142-201ENSMUST00000198670 361 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm8209-201ENSMUST00000206386 553 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm45072-201ENSMUST00000208673 929 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm30738-201ENSMUST00000221346 502 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Platr25-208ENSMUST00000222602 939 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm5265-201ENSMUST00000076828 342 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm22507-201ENSMUST00000082773 160 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav12-2A0N8N6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm13349-201ENSMUST00000118436 411 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm9119-201ENSMUST00000118866 495 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm14877-201ENSMUST00000119803 478 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm12693-201ENSMUST00000121965 483 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm25807-201ENSMUST00000122783 305 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm18520-201ENSMUST00000174783 658 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm25470-201ENSMUST00000175576 111 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm20673-201ENSMUST00000177167 430 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm38018-201ENSMUST00000195651 540 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm45192-201ENSMUST00000206749 283 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm44718-201ENSMUST00000206886 359 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm18598-201ENSMUST00000207724 597 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Gm18557-201ENSMUST00000218710 433 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.51□□□□□ -2.01
Trav12-2A0N8N6 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav12-2A0N8N6 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trav12-2A0N8N6 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trav12-2A0N8N6 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trav12-2A0N8N6 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.5□□□□□ -2.01
Trav12-2A0N8N6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Trav12-2A0N8N6 Gm22939-201ENSMUST00000103958 131 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms