Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm26437-201ENSMUST00000082595 105 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.36□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm25764-201ENSMUST00000104092 134 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm22590-201ENSMUST00000104247 128 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm14987-201ENSMUST00000117820 676 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm6265-201ENSMUST00000149263 231 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm3370-201ENSMUST00000171785 500 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm26928-201ENSMUST00000182674 572 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm1833-201ENSMUST00000191608 682 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm38076-201ENSMUST00000193889 450 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29747-201ENSMUST00000194764 585 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm38268-201ENSMUST00000195813 193 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm44030-201ENSMUST00000204865 432 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm45588-201ENSMUST00000211213 630 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.35□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm15988-201ENSMUST00000118677 367 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm26477-201ENSMUST00000122617 323 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm22722-201ENSMUST00000157467 132 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm24720-201ENSMUST00000157518 166 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm22833-201ENSMUST00000158292 132 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm25977-201ENSMUST00000158697 85 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm20673-201ENSMUST00000177167 430 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29104-201ENSMUST00000186304 222 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm29602-201ENSMUST00000186887 442 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm37866-201ENSMUST00000191950 696 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm32381-201ENSMUST00000203192 476 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm44513-201ENSMUST00000206811 439 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Gm5265-201ENSMUST00000076828 342 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Mir21a-201ENSMUST00000083521 92 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Trbv1A0A0B4J1G7 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trbv1A0A0B4J1G7 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm2348-201ENSMUST00000108782 300 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14879-201ENSMUST00000117308 507 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14981-201ENSMUST00000117325 943 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm16431-201ENSMUST00000117454 431 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm6274-201ENSMUST00000118173 797 ntBASIC2.33□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm5958-201ENSMUST00000147698 297 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms