Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm15111-201ENSMUST00000122142 878 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm23791-201ENSMUST00000122553 293 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm25292-201ENSMUST00000122797 322 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm23583-201ENSMUST00000158533 289 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm29602-201ENSMUST00000186887 442 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm7182-201ENSMUST00000193351 732 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Gm8423-201ENSMUST00000211387 607 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
H2afb2S4R1M3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm23691-201ENSMUST00000101878 107 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm22590-201ENSMUST00000104247 128 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm13603-201ENSMUST00000119404 83 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm12495-201ENSMUST00000119750 447 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm22960-201ENSMUST00000122517 104 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm16331-201ENSMUST00000144274 498 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm27233-201ENSMUST00000184030 307 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm35212-201ENSMUST00000196672 606 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm9375-201ENSMUST00000208899 903 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm35262-201ENSMUST00000215133 267 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm24707-201ENSMUST00000082812 107 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm24446-201ENSMUST00000083982 156 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.11□□□□□ -1.91
H2afb2S4R1M3 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Mir208b-201ENSMUST00000104735 77 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Mir190b-201ENSMUST00000104803 80 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm6274-201ENSMUST00000118173 797 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm14607-201ENSMUST00000119119 491 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm6664-201ENSMUST00000119138 468 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm15452-201ENSMUST00000119877 240 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm15190-201ENSMUST00000120855 276 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm20526-201ENSMUST00000173416 158 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm6900-201ENSMUST00000178971 342 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm27428-201ENSMUST00000184289 110 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm28560-201ENSMUST00000186091 315 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm29104-201ENSMUST00000186304 222 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm28334-201ENSMUST00000186653 315 ntBASIC3.1□□□□□ -1.91
H2afb2S4R1M3 Gm28495-201ENSMUST00000188452 315 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms