Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.53□□□□□ -1.52
Prpf40aQ9R1C7 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm12647-201ENSMUST00000118977 265 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm25389-201ENSMUST00000157340 286 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm26320-201ENSMUST00000157742 306 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm23318-201ENSMUST00000158000 108 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm24085-201ENSMUST00000175172 116 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm22114-201ENSMUST00000177756 107 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm7958-201ENSMUST00000178255 468 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm7950-201ENSMUST00000179633 468 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm27818-201ENSMUST00000184536 159 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm44385-201ENSMUST00000198781 81 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm2011-203ENSMUST00000203750 435 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm18306-201ENSMUST00000207338 569 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm19256-201ENSMUST00000218550 231 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm25818-201ENSMUST00000083282 164 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm23972-201ENSMUST00000083322 165 ntBASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Prpf40aQ9R1C7 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm11550-201ENSMUST00000118210 699 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm6565-201ENSMUST00000121217 438 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm25454-201ENSMUST00000157947 315 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm20534-201ENSMUST00000172957 172 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm5139-201ENSMUST00000175943 249 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Mir6346-201ENSMUST00000183982 81 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Mir6372-201ENSMUST00000185114 109 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm29334-201ENSMUST00000190334 357 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm29813-201ENSMUST00000195856 447 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm44456-201ENSMUST00000196554 89 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm43712-201ENSMUST00000198020 291 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm18007-201ENSMUST00000205019 844 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 AC140477.1-201ENSMUST00000222354 246 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Gm6361-201ENSMUST00000091031 435 ntBASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Prpf40aQ9R1C7 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm25418-201ENSMUST00000104214 129 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Mir466h-201ENSMUST00000104748 81 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm11600-201ENSMUST00000119592 240 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm12956-201ENSMUST00000122184 414 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm25824-201ENSMUST00000157092 121 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm26404-201ENSMUST00000158498 109 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm26195-201ENSMUST00000175035 101 ntBASIC5.5□□□□□ -1.53
Prpf40aQ9R1C7 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms