Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trem3Q9JKE1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm14607-201ENSMUST00000119119 491 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm26099-201ENSMUST00000157248 109 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm24879-201ENSMUST00000158386 143 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm45078-201ENSMUST00000205343 546 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm44600-201ENSMUST00000208540 111 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
Trem3Q9JKE1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm6429-201ENSMUST00000117144 475 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm14841-201ENSMUST00000121067 758 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm12095-201ENSMUST00000121962 816 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm12755-201ENSMUST00000122297 282 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm26411-201ENSMUST00000157668 107 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm24553-201ENSMUST00000158653 131 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm6264-202ENSMUST00000162896 1217 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm38214-201ENSMUST00000192581 988 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm17987-201ENSMUST00000206902 603 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trem3Q9JKE1 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm14579-201ENSMUST00000117068 283 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm16100-201ENSMUST00000120489 231 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm24240-201ENSMUST00000157785 135 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Mir6363-201ENSMUST00000184880 114 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm10925-201ENSMUST00000189941 678 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm7897-201ENSMUST00000193981 554 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm6615-201ENSMUST00000199426 631 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm43295-201ENSMUST00000201439 412 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.11□□□□□ -2.07
Trem3Q9JKE1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms