Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm44355-201ENSMUST00000200417 104 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm43026-201ENSMUST00000202972 325 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 BC051076-202ENSMUST00000199477 2868 ntBASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim54Q9ERP3 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm24273-201ENSMUST00000102332 164 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm14293-201ENSMUST00000118528 577 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm14627-201ENSMUST00000118931 567 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm11704-201ENSMUST00000120031 214 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm12226-201ENSMUST00000144172 876 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm23168-201ENSMUST00000157156 143 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm23602-201ENSMUST00000157258 132 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm22310-201ENSMUST00000157509 116 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm26187-201ENSMUST00000157693 101 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm24008-201ENSMUST00000157733 138 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm27733-201ENSMUST00000184803 68 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm43652-201ENSMUST00000196219 675 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm45240-201ENSMUST00000211437 674 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm24626-201ENSMUST00000082621 161 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm26206-201ENSMUST00000082908 110 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim54Q9ERP3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm3940-201ENSMUST00000105087 432 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm15026-201ENSMUST00000119219 458 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm13482-201ENSMUST00000119842 254 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm13687-201ENSMUST00000119857 282 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm14687-201ENSMUST00000120206 363 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm14240-201ENSMUST00000120353 546 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm13743-201ENSMUST00000121486 724 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm24244-201ENSMUST00000157317 130 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm25706-201ENSMUST00000157828 247 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Mir1934-201ENSMUST00000158127 83 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm20399-201ENSMUST00000174652 132 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm24968-201ENSMUST00000179817 107 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm26556-201ENSMUST00000180645 320 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm28785-201ENSMUST00000187478 379 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm45590-201ENSMUST00000209715 262 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm18225-201ENSMUST00000216708 742 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.04□□□□□ -1.76
Trim54Q9ERP3 AC123062.1-201ENSMUST00000221287 481 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 Gm25586-201ENSMUST00000082499 112 ntBASIC4.04□□□□□ -1.76
Trim54Q9ERP3 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms