Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm22444-201ENSMUST00000093693 108 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Lima1Q9ERG0 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
Lima1Q9ERG0 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm24403-201ENSMUST00000104616 130 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm14469-201ENSMUST00000118363 202 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm24787-201ENSMUST00000157380 123 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm26000-201ENSMUST00000157991 107 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Mir1264-201ENSMUST00000175381 86 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm27921-201ENSMUST00000183968 108 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm29576-201ENSMUST00000188020 678 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm28354-201ENSMUST00000190904 678 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm44348-201ENSMUST00000200165 122 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm44665-201ENSMUST00000205381 251 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Lima1Q9ERG0 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm23886-201ENSMUST00000122684 313 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm26099-201ENSMUST00000157248 109 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm23380-201ENSMUST00000158448 103 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Atp2b4-208ENSMUST00000167348 243 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm27760-201ENSMUST00000185048 114 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm28314-201ENSMUST00000191276 345 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm43954-201ENSMUST00000204634 544 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm44208-201ENSMUST00000205199 421 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm23975-201ENSMUST00000082685 106 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm23264-201ENSMUST00000083372 107 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Gm44286-201ENSMUST00000204098 1487 ntBASIC2.7□□□□□ -1.98
Lima1Q9ERG0 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm25728-201ENSMUST00000104525 159 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm23911-201ENSMUST00000104596 134 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm15272-201ENSMUST00000120865 233 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm14841-201ENSMUST00000121067 758 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm14101-201ENSMUST00000121502 473 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm24436-201ENSMUST00000157889 302 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm25902-201ENSMUST00000158493 318 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Gm24681-201ENSMUST00000158760 107 ntBASIC2.69□□□□□ -1.98
Lima1Q9ERG0 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms