Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Gm42870-201ENSMUST00000199355 3470 ntBASIC5.13□□□□□ -1.59
Upf1Q9EPU0 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm14282-201ENSMUST00000119484 240 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm14919-201ENSMUST00000120839 390 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm26036-201ENSMUST00000158149 144 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm27190-201ENSMUST00000184890 542 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm21673-201ENSMUST00000186640 436 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm21135-201ENSMUST00000189023 436 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm7858-201ENSMUST00000190177 622 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm5023-201ENSMUST00000217442 587 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm25579-201ENSMUST00000083407 106 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.12□□□□□ -1.59
Upf1Q9EPU0 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm25595-201ENSMUST00000102273 97 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm14973-201ENSMUST00000117248 255 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm15268-201ENSMUST00000118845 352 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm8217-201ENSMUST00000119136 465 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm15745-201ENSMUST00000119807 115 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm22101-201ENSMUST00000157928 103 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm24850-201ENSMUST00000158029 119 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm22890-201ENSMUST00000158642 144 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm16569-201ENSMUST00000160526 314 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm29365-201ENSMUST00000189461 699 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm44824-201ENSMUST00000207021 229 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 AC161572.1-201ENSMUST00000227486 640 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Upf1Q9EPU0 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm23319-201ENSMUST00000104467 131 ntBASIC5.1□□□□□ -1.59
Upf1Q9EPU0 Gm13711-201ENSMUST00000119708 453 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms