Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm3370-201ENSMUST00000171785 500 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm29299-201ENSMUST00000185609 923 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm29573-201ENSMUST00000190291 919 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm44393-201ENSMUST00000197418 138 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm18645-202ENSMUST00000212222 760 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm18892-201ENSMUST00000217628 881 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm23628-201ENSMUST00000082464 173 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm23615-201ENSMUST00000082602 65 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Cdc40Q9DC48 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Mir693-201ENSMUST00000102187 89 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Mir599-201ENSMUST00000102378 88 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm24119-201ENSMUST00000103979 246 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm14981-201ENSMUST00000117325 943 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm11429-201ENSMUST00000119089 144 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm15190-201ENSMUST00000120855 276 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm12819-201ENSMUST00000122223 629 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm15274-201ENSMUST00000131442 291 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm21979-201ENSMUST00000139887 291 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm15259-201ENSMUST00000151262 291 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm23668-201ENSMUST00000157465 111 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm24190-201ENSMUST00000157976 216 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm18520-201ENSMUST00000174783 658 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm20612-201ENSMUST00000176318 236 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm22392-201ENSMUST00000177971 107 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm27999-201ENSMUST00000183539 193 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm28390-201ENSMUST00000185212 700 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm28282-201ENSMUST00000186072 186 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm29259-201ENSMUST00000186396 694 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm29602-201ENSMUST00000186887 442 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm32447-201ENSMUST00000194265 697 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 Gm44137-201ENSMUST00000203670 367 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.85□□□□□ -1.95
Cdc40Q9DC48 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms