Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc39Q9D5Y1 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Mir592-201ENSMUST00000102113 96 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Mir693-201ENSMUST00000102187 89 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm24273-201ENSMUST00000102332 164 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm24671-201ENSMUST00000104159 158 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm24890-201ENSMUST00000104389 102 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm11898-201ENSMUST00000117161 385 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm13504-201ENSMUST00000117490 316 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm22187-201ENSMUST00000157819 129 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm26297-201ENSMUST00000179464 132 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm38154-201ENSMUST00000195444 340 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm43239-201ENSMUST00000200131 201 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm44404-201ENSMUST00000203979 636 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Gm23628-201ENSMUST00000082464 173 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.67□□□□□ -1.82
Ccdc39Q9D5Y1 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm12149-201ENSMUST00000117511 654 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14943-201ENSMUST00000118056 546 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm12889-201ENSMUST00000118684 241 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14901-201ENSMUST00000119001 283 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm14253-201ENSMUST00000122112 639 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm4761-201ENSMUST00000178086 582 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm43746-201ENSMUST00000200028 317 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.66□□□□□ -1.82
Ccdc39Q9D5Y1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.65□□□□□ -1.82
Ccdc39Q9D5Y1 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc39Q9D5Y1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm23431-201ENSMUST00000104006 107 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm7071-201ENSMUST00000120458 462 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm22322-201ENSMUST00000157151 111 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm23167-201ENSMUST00000157155 103 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm25120-201ENSMUST00000180148 79 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Mir8096-201ENSMUST00000184526 127 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm18327-201ENSMUST00000202426 830 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm6369-201ENSMUST00000069626 412 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.65□□□□□ -1.83
Ccdc39Q9D5Y1 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm15159-201ENSMUST00000117062 764 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm13678-201ENSMUST00000118926 340 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm16458-201ENSMUST00000121428 502 ntBASIC3.64□□□□□ -1.83
Ccdc39Q9D5Y1 Gm24840-201ENSMUST00000122603 147 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms