Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm38329-201ENSMUST00000193473 427 ntBASIC3.07□□□□□ -1.92
Ccdc7Q9D541 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc7Q9D541 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc7Q9D541 Gm45678-201ENSMUST00000210509 295 ntBASIC3.07□□□□□ -1.92
Ccdc7Q9D541 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.07□□□□□ -1.92
Ccdc7Q9D541 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.07□□□□□ -1.92
Ccdc7Q9D541 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm26143-201ENSMUST00000104480 108 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm14607-201ENSMUST00000119119 491 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm6071-201ENSMUST00000119561 440 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm7350-201ENSMUST00000120964 636 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm16458-201ENSMUST00000121428 502 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm23600-201ENSMUST00000157260 71 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm26487-201ENSMUST00000158022 94 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm3370-201ENSMUST00000171785 500 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm25944-201ENSMUST00000178758 94 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Mir6401-201ENSMUST00000184499 109 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm43992-201ENSMUST00000204358 197 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm45860-201ENSMUST00000212700 334 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc7Q9D541 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.06□□□□□ -1.92
Ccdc7Q9D541 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm22072-201ENSMUST00000116850 121 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm14982-201ENSMUST00000121102 442 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm16359-201ENSMUST00000124511 289 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm24875-201ENSMUST00000158888 104 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm28847-201ENSMUST00000186778 700 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm29365-201ENSMUST00000189461 699 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.05□□□□□ -1.92
Ccdc7Q9D541 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc7Q9D541 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Snora36b-201ENSMUST00000104383 132 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm24831-201ENSMUST00000116778 126 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm25539-201ENSMUST00000116886 122 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm13574-201ENSMUST00000120482 394 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm7308-201ENSMUST00000121087 447 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm22792-201ENSMUST00000157225 133 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm17204-201ENSMUST00000167936 478 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm24417-201ENSMUST00000178123 79 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm24653-201ENSMUST00000178541 79 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm25934-201ENSMUST00000178642 79 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm25528-201ENSMUST00000180264 132 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm29658-201ENSMUST00000185404 230 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm34314-201ENSMUST00000203622 367 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm44526-201ENSMUST00000204664 121 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 Gm45409-201ENSMUST00000211486 252 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.04□□□□□ -1.92
Ccdc7Q9D541 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.03□□□□□ -1.92
Ccdc7Q9D541 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.03□□□□□ -1.92
Ccdc7Q9D541 Gm11577-201ENSMUST00000118030 737 ntBASIC3.03□□□□□ -1.92
Ccdc7Q9D541 Gm15126-201ENSMUST00000118631 833 ntBASIC3.03□□□□□ -1.92
Ccdc7Q9D541 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc7Q9D541 Gm12819-201ENSMUST00000122223 629 ntBASIC3.03□□□□□ -1.92
Ccdc7Q9D541 Gm22416-201ENSMUST00000158590 88 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms