Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Ddx56Q9D0R4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm13478-201ENSMUST00000118312 413 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm14688-201ENSMUST00000119169 303 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm13000-201ENSMUST00000120937 496 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm9225-201ENSMUST00000121921 836 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm22453-201ENSMUST00000122801 318 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm25908-201ENSMUST00000157624 98 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm22314-201ENSMUST00000158007 281 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm24552-201ENSMUST00000158646 103 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm20698-201ENSMUST00000175657 233 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm28263-201ENSMUST00000185884 400 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm10193-201ENSMUST00000188288 231 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm28299-201ENSMUST00000189908 339 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm29184-201ENSMUST00000190038 334 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm35702-201ENSMUST00000198653 511 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm29848-201ENSMUST00000203107 295 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.41□□□□□ -1.7
Ddx56Q9D0R4 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Ddx56Q9D0R4 Gm13574-201ENSMUST00000120482 394 ntBASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm22135-201ENSMUST00000158752 108 ntBASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Mir6363-201ENSMUST00000184880 114 ntBASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm27414-201ENSMUST00000185033 381 ntBASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm29216-201ENSMUST00000187117 492 ntBASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.4□□□□□ -1.71
Ddx56Q9D0R4 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm6079-201ENSMUST00000121356 404 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm22452-201ENSMUST00000122804 104 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm16354-201ENSMUST00000155376 150 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm23234-201ENSMUST00000157304 134 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm25456-201ENSMUST00000157952 109 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm25534-201ENSMUST00000175365 125 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Mir6537-201ENSMUST00000184150 110 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm27190-201ENSMUST00000184890 542 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm2950-201ENSMUST00000185530 520 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm21673-201ENSMUST00000186640 436 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm21135-201ENSMUST00000189023 436 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm37300-201ENSMUST00000193327 280 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm38332-201ENSMUST00000194189 147 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm43649-201ENSMUST00000196596 391 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 Gm45273-201ENSMUST00000211559 281 ntBASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.39□□□□□ -1.71
Ddx56Q9D0R4 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms