Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm10067-201ENSMUST00000179462 348 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm24968-201ENSMUST00000179817 107 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm28623-201ENSMUST00000187219 192 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm5268-201ENSMUST00000189212 940 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm37575-201ENSMUST00000195467 309 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm2314-201ENSMUST00000200391 586 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm45814-201ENSMUST00000212646 775 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm18116-201ENSMUST00000220920 537 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm23443-201ENSMUST00000082916 128 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ddx28Q9CWT6 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm12095-201ENSMUST00000121962 816 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm26476-201ENSMUST00000122618 313 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm22390-201ENSMUST00000157588 325 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm22733-201ENSMUST00000158094 91 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm22769-201ENSMUST00000158367 98 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm23352-201ENSMUST00000158428 64 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm24550-201ENSMUST00000158648 279 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm17183-201ENSMUST00000171170 493 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm24925-201ENSMUST00000178157 107 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm43114-201ENSMUST00000198298 343 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm34091-201ENSMUST00000200875 604 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm43232-201ENSMUST00000201346 364 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm43155-201ENSMUST00000202661 494 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm18507-201ENSMUST00000218855 525 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ddx28Q9CWT6 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm12225-201ENSMUST00000117995 298 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm13349-201ENSMUST00000118436 411 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm15060-201ENSMUST00000119550 948 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm12900-201ENSMUST00000120919 573 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm12706-201ENSMUST00000121588 698 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm25052-201ENSMUST00000122661 158 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm24393-201ENSMUST00000158135 97 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm16290-201ENSMUST00000161175 474 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm22120-201ENSMUST00000175590 70 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm25451-201ENSMUST00000177832 121 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm28666-201ENSMUST00000186649 274 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm43541-201ENSMUST00000197208 581 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Mir129b-201ENSMUST00000197461 65 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm5551-201ENSMUST00000199720 690 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm44181-201ENSMUST00000203106 483 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm18194-201ENSMUST00000210455 481 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm18414-201ENSMUST00000210858 694 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm45796-201ENSMUST00000212483 114 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm18903-201ENSMUST00000215343 480 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ddx28Q9CWT6 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms