Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm6913-201ENSMUST00000100019 348 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm13167-201ENSMUST00000118554 578 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm22960-201ENSMUST00000122517 104 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm23819-201ENSMUST00000158744 109 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm25026-201ENSMUST00000175017 188 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm27999-201ENSMUST00000183539 193 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Mir7k-201ENSMUST00000184115 110 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm29104-201ENSMUST00000186304 222 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm9632-201ENSMUST00000195934 643 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm44392-201ENSMUST00000196758 115 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm44554-201ENSMUST00000208738 147 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm20948-201ENSMUST00000211091 449 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Snord35b-201ENSMUST00000082833 87 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm22043-201ENSMUST00000082993 158 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.63□□□□□ -1.83
Smc1aQ9CU62 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm24120-201ENSMUST00000103978 129 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm25308-201ENSMUST00000104171 158 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Mir1198-201ENSMUST00000116995 121 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm14939-201ENSMUST00000120347 680 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm16053-201ENSMUST00000120511 188 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm9001-201ENSMUST00000121642 399 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm23183-201ENSMUST00000122595 323 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm23716-201ENSMUST00000157348 144 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm26866-201ENSMUST00000180414 802 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Mir6413-201ENSMUST00000184049 108 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm29740-201ENSMUST00000193182 655 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm7142-201ENSMUST00000194232 586 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm37417-201ENSMUST00000195257 454 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm8209-201ENSMUST00000206386 553 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm6842-201ENSMUST00000211361 390 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm35405-201ENSMUST00000218754 400 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smc1aQ9CU62 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm24340-201ENSMUST00000104208 97 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm25317-201ENSMUST00000116824 129 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm15159-201ENSMUST00000117062 764 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm13731-201ENSMUST00000117332 196 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm13717-201ENSMUST00000119868 365 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm7308-201ENSMUST00000121087 447 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm14368-201ENSMUST00000145305 415 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm25902-201ENSMUST00000158493 318 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm17038-201ENSMUST00000166586 494 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm20534-201ENSMUST00000172957 172 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Mir3112-201ENSMUST00000175431 82 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm22910-201ENSMUST00000178568 132 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm26701-201ENSMUST00000181571 234 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm37085-201ENSMUST00000193780 196 ntBASIC3.61□□□□□ -1.83
Smc1aQ9CU62 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.61□□□□□ -1.83
Smc1aQ9CU62 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms